Lathyrus oleraceus (garden pea): 127075460
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Entry
127075460 CDS
T08598
Name
(RefSeq) cyclic nucleotide-gated ion channel 4-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
127075460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psat04040
]
127075460
Ion channels [BR:
psat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127075460
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Motif
Pfam:
cNMP_binding
Ion_trans
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
127075460
NCBI-ProteinID:
XP_050872883
LinkDB
All DBs
Position
4:360303394..360325159
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AA seq
670 aa
AA seq
DB search
MATPTTEQNMPRAFHMHDTITDEDGDVTEDSEPENHNEEEEEQQAVNYRSSITSVGISRV
VDPRAKWVQEWNRVFLLVCGAGLFVDPLFFYALSISDSFMCLFIDGWFAVTVTVLRCMTD
ALHLWHIFLRFKMAKRNSFVISGDTAGADARCSVALAYLKSRRGFFFDLFVILPIPQIVL
WVAIPSLLEQGSVTLVMTILLIVFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALN
MIAYFVASHAAGACWYLLGIQRATKCLKEQCLKTNGCGIKILSCHKPIYYGSTSLLNKEI
RRMWWADNREARSTCINGPDNFNYGAYKWTVQLVTNDNRLEKILFPIFWGLMTLSTFGNL
ESTTDWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQVMQLKMRNVEWWMRKKHL
PQGFRQRVRNYERQRWAAMRGVDECEMTKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDEL
VLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGLKSCCMLGPGNFS
GDELLSWCLRRPFIERLPLSTSTLVTLETTEAFGLEAQDVKYVTQHFRYTFVKEKVKRSA
RYYSPGWRTWAAVAIQLAWRRYRHRLTLNSLSFIRPRRPLSRCSSLGEDRLRLYTALLTS
PKPNQDDFDF
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccaacaacagaacaaaacatgccacgtgcttttcacatgcacgacaccatc
acagacgaagacggagatgtaactgaggacagcgagccggagaatcacaacgaagaagaa
gaagagcagcaagcagtgaattatagaagctcaatcacttctgtaggtattagtcgagtt
gtggacccaagagcgaaatgggtgcaagaatggaacagagtgttcttgctagtatgcgga
gcagggttgtttgtggatccactgttcttctacgccctttccatcagcgactcatttatg
tgcctcttcatcgacggctggttcgccgtcaccgtaacggtgctccgttgcatgactgac
gctttacacctttggcatatcttcctccgctttaagatggcaaaacgcaactcattcgta
atctccggggatactgcgggagctgatgcccgatgctcggtggctcttgcttatcttaag
tcccgccgcggcttcttctttgatctcttcgttattcttcctatacctcagattgtgctt
tgggtggcaatcccttctctgttggagcaaggttcagttacgttggtgatgacaatatta
ttaattgtatttctgttccaataccttcccaaaatttatcactcagtatgccatcttaga
cgcacacaaaacctgtctggctacatttttggaactgtttggtggggtattgctcttaac
atgatcgcctattttgtagcttcccatgctgcaggcgcatgttggtacttgttggggatc
caaagagcaacgaaatgtctgaaagagcaatgtctgaaaacaaatggttgtggcataaaa
atattgtcttgtcataagccaatatattatggaagtacaagtttgttgaataaagaaatt
agaagaatgtggtgggcagataatagggaagcaaggtctacatgcataaatggtccagat
aacttcaactatggagcttataaatggactgttcaacttgtcactaatgataacagactt
gaaaagatactttttcctatcttttggggcctaatgactctcagcactttcgggaaccta
gaaagcacaacggactggctagaagtagttttcaatatcatagtcttgactagtggcctt
cttcttgtgactatgctgattggaaacatcaaggtgtttttgcatgcaacaacatcaaag
aaacaagtgatgcaattgaagatgagaaatgttgaatggtggatgaggaaaaaacatttg
ccgcaggggtttcgacaacgtgtgcgtaactatgaaagacagcgctgggctgctatgcgt
ggggttgatgaatgtgaaatgaccaaaaatcttcctgaaggtttaagaagagacatcaaa
tatcatctttgtttggatttggtcagacaggtgccattgtttcaacatatggacgagctg
gttcttgagaatatatgtgaccgagttaaatctctcatattcaccaagggagaaacaata
gcaagagaaggagacccagttcaaagaatgctatttgtggtgaggggacaccttcaaagt
agccaagtattaagggacgggttaaaaagttgctgcatgttagggccaggaaatttcagt
ggtgatgagcttctttcatggtgtttgagaagacccttcatagagcgacttccactgtca
acatcaacacttgtcacacttgaaacaacagaggcttttggtcttgaagcacaagatgtc
aagtatgtcacacaacatttcaggtacacgtttgtgaaggaaaaggtcaagagaagtgct
aggtattactcaccggggtggcgaacttgggctgctgtggccattcagttagcatggaga
aggtacagacataggttgacattgaactcattgtcttttataagacctaggagaccattg
tcaagatgctcttccttgggagaggataggcttcgactctacacagctttgttaacttca
ccaaagcctaatcaggatgattttgatttttga
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