Pisum sativum (pea): 127075556
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Entry
127075556 CDS
T08598
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
psat
Pisum sativum (pea)
Pathway
psat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127075556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127075556
03012 Translation factors [BR:
psat03012
]
127075556
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127075556
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127075556
Translation factors [BR:
psat03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127075556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
T2SSE
AAA_23
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
127075556
NCBI-ProteinID:
XP_050872977
LinkDB
All DBs
Position
4:complement(379057317..379073347)
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AA seq
1154 aa
AA seq
DB search
MHNLKPAASFLIARAKSLHLRHYNYRFVTSSSPSLLFNFEPSLSSFLSCSKPFISTRCFS
GYYNLEQFSDDEYDCEFENHQASSTVANVDEWKWKLSMLLRNEKDQEIVSRDKRDRRDYE
QIANLAKRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLVQEY
LDRLQLNSEKTTDCLDSVNSTNQVKDIEMNENANSFVDESVMEKVLQKRSLRMRNMQRSW
QESPEGKKMLEFRKSLPSFKEKEGLLQAIARNQVIVISGETGCGKTTQLPQYILESEIES
GRGAFCSIICTQPRRISAMAVAERVSAERGESLGETVGFKVRLEGMRGKNTHLLFCTSGI
LLRRLLSDRNLSGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELF
SNYFGGAPTFHIPGFTYPVRAHFLEDVLEMTGYKLSSFNQVDDYGQDKLWKTQKQLAPRK
RKNQITALVEDALSKSSFENYSPKTRDSLSSWTPDCIGFNLIEAVLCHICRKERPGAVLV
FMTGWEDISCLRDQLKAHPLLGDPNRVLLQTCHGSMATSEQKLIFDRAPPNVRKIVLATN
MAEASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGESY
HLYPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESIGEFLSSALQAPKPRAVQNAIG
FLTMIGALDEKENLTNLGKFLSILPVDPKLGKMLIMGAIFRCFDPVLTIVAGLSVRDPFL
LPQDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAI
HSLRKQFSFILKEAGLVDTDASINNKSSHNQSLVRAVICSGLFPGIASVVHRETSMSFKT
MDDGQVLLYANSVNARYQTIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGTLSNGI
QAGHLKMLDGYVDFFLDPNLADCYLKLKEELDKLIQKKLEDPNIDIHKEGKYLMLAVQEL
VSGDQCEGRFVFGRDSRKPKASNDENKFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKT
NEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTHTSDNTQHEDDKSPPDVTDNML
KLLGKRRKSKRRFD
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgcataatctaaaacccgcagcgtctttcctcatagctcgtgctaagtctcttcaccta
cgccactacaactatcgctttgtcacttcatcttcaccgtcactcttattcaactttgaa
ccctcgctttcttctttcttatcctgttctaaaccgtttatttccacgcgctgcttctct
ggatactacaatctcgaacagttctctgatgatgaatatgactgtgaatttgagaaccac
caggcatcatctactgtggccaatgtggatgagtggaaatggaaacttagtatgctgtta
cggaatgaaaaggatcaggagattgtatctagagataaaagagataggagagactatgaa
caaattgctaaccttgccaaaagaatgggactttacagtgagctgtttggaaaagtagtt
gttgcaagcaaagtgcctcttcctaactaccgaccagatttggatgacaaacgtccacaa
agagaggttgtgattccactaagcttgcaaaggagggtggagggtttagtgcaggagtac
cttgataggctgcaattaaattctgaaaagacaactgactgtttggatagtgttaattcc
accaatcaggttaaagatatagaaatgaatgaaaatgccaattcttttgtggacgagtct
gttatggaaaaggttctacagaagaggagtttgaggatgcgtaatatgcaaagatcttgg
caggaatctcctgaaggcaagaagatgctggaattccggaagtctttaccttcatttaag
gagaaggaaggtttactacaagctatagcacgtaatcaggtaatagttatatctggagag
actggctgtggtaaaacgactcaacttcctcaatatatattagagtcagagatagagtcc
ggccgtggggcattttgcagcattatttgcacacagcctcgaaggatatctgctatggca
gtggctgagagagtgtcagcagagagaggagagtctctgggtgaaacagttggtttcaaa
gttcggttagaaggaatgagagggaaaaacacccatctgttattttgtaccagcggtata
ttactccgaaggttgctgagtgatcggaatctaagtggtataacccatgtgtttgtggat
gaaattcacgagcgaggcatgaatgaagacttcttactgattgtgttgaaggatcttctt
ccacgtcgccgtgatttaagattggtattgatgagtgccactttgaatgcggaacttttt
tcaaattattttggaggtgcaccgacatttcatatcccgggtttcacctatcctgtaaga
gctcactttttagaagatgttttggaaatgactggatataaattgtcttctttcaaccaa
gttgatgattatggtcaagataaattgtggaaaacacaaaagcagcttgcaccacgtaag
aggaaaaaccagatcactgctcttgttgaggatgctctttctaaatcaagcttcgagaac
tatagtcccaagacacgtgattcattatcttcttggacaccggactgcataggatttaat
ctcattgaggctgttctatgccatatatgtcggaaggaaagacctggtgctgtcttagta
tttatgactgggtgggaggatataagctgtttaagagatcagcttaaagcacatcctctt
ttaggagatcccaatagggttctgcttcaaacatgccatggttcaatggcaacttctgaa
cagaaactcattttcgatagagcacctccaaatgtaaggaaaatagtacttgctacaaat
atggcagaggcaagtattacgatcaacgacatagtttttgttgtcgactgtggaaaagca
aaagagaccacttatgatgctttgaataacacaccatgtctactaccttcttggatttca
caagcatctgcacggcagagaagaggtagggccggtcgagtgcagccaggagaatcctac
cacctttaccccaaatgtgtttatgaagctttttctgaatatcaacttcctgaacttttg
agaacacccctgaactctctttgcttgcaaataaaaagtttgcaggttgagagcattgga
gaattcctatcatcagctttgcaggcaccaaagccacgtgctgttcaaaatgctattggt
tttctcacgatgattggagcgttagatgaaaaagaaaatcttaccaatcttgggaagttt
ctctccatacttcctgtagatcccaagctgggaaaaatgctgataatgggggctatattt
cggtgctttgatcctgttcttacaatagttgccggccttagtgtcagagatcctttcctc
ttgccccaagacaagagagatttagcagggactgctaagtctaggttttctgctaaagat
tacagtgatcatatggctcttgttcgagcatatgaaggatggaaagatgctgaaagagaa
ggatcagcttatgaatactgctggagaaattttctctcagcccaaactcttcaggcaatt
cattctcttcggaagcaattcagcttcatcttgaaagaagctggcttggtagatacagat
gcaagcattaataacaaatcgagtcataatcaatctcttgtacgtgctgtcatatgttct
ggactctttcctggcatagcatcagtggtgcacagggagacatccatgtcatttaagaca
atggacgatggccaggttttattatatgcaaactcagtgaatgcacggtaccagactatt
ccttacccatggttggtttttggtgagaaagtaaaggtcaatgctgttttcatccgtgat
tccactggtgtatctgattcaatacttatcctatttggcggtactctaagtaatgggata
caggccgggcatctgaaaatgttagatgggtatgttgacttctttttggatcctaattta
gctgactgctatttgaagctcaaggaagaacttgataagcttatccaaaagaagctagaa
gatcctaacattgacattcataaggaagggaagtacttgatgctagctgttcaggaattg
gtctcaggggatcagtgtgaaggtagatttgtgtttggccgtgacagccggaagcctaag
gcctctaacgacgagaataagttcacaaaagatggaacaaaccccaagagcttgctccaa
acacttttgatgcgggcagggcattcccctccaaaatacaaaacaaaacacctgaagaca
aatgagttcagagcattggtggagtttaaaggaatgcaatttgttggcaaaccgaaaaga
aacaagcagcttgcagaaagggatgccgctatagaggcattggcttggttaactcacacc
tctgacaatactcagcatgaagacgataaatctcctcctgatgttactgacaacatgtta
aaactcctagggaagcgtagaaaatcaaaacggcgttttgattga
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integrated database retrieval system
