Lathyrus oleraceus (garden pea): 127075703
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Entry
127075703 CDS
T08598
Name
(RefSeq) flowering time control protein FY isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127075703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127075703
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127075703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR41
WDR90_beta-prop_4th
eIF2A
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_like
NBCH_WD40
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_HPS5
WD_LRWD1
Beta-prop_DCAF12
Tricorn_2nd
PROPPIN
Motif
Other DBs
NCBI-GeneID:
127075703
NCBI-ProteinID:
XP_050873120
LinkDB
All DBs
Position
4:complement(405881413..405895568)
Genome browser
AA seq
725 aa
AA seq
DB search
MMYNDPHNPQHQHPYQQQQQQQQHFHHPQPGMEFHRGPPPPMPQQPPPMMRQPSASSTNI
APEFHHPGPGGPPGPPPHYDVTVHNDIHGAKRMRKLTQRKAVDYTSTVVRYMQIRMSQRD
SRDRTVLQSTPAAAIDMLPAAGYSDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLI
TGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNV
KANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVKSVDWHP
TKSLLVSGGKDNLVKLWDAKSGKELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYD
IRAMKELESFRGHRKDVTTLAWHPFHEEYFVSGSYDGSIFHWLVGHDTPQIEICNAHDNN
VWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDSARDRYNNGMSGYPEQNPVGGRVGGSFA
IPEGPTTPGPFAPGLTRNEGTIPGVGVAMPLSIPSVDGPQGEQKQPHPGSMGAPPLPPGP
HPSLLNPNQQQPFQQNPQQIPQHQHQALSQQMGPLPMPPNMPQLQHPSHSPMVPHQHLPR
PPPQMPHGMPGSLQVPTSHPMQIPGPMGMQGGMNQMGPPMPQGHYVGMNQMHSGPLPASG
GPPLGGFPNNMQGPSNTSYPQGAPFNRPQGGQMPMMQGYNPYQSGNQPGMPPNAQPGGPH
SQMPQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacaatgaccctcataaccctcagcaccagcacccgtatcaacaacaacagcag
caacagcagcattttcaccatccgcagccaggtatggaattccaccgtggacctcctccg
ccgatgcctcagcagcctccacctatgatgcggcaaccttccgcttcttccactaacatc
gccccggagtttcaccatccaggacctggaggccccccaggtcctcctcctcattacgat
gttacagttcataatgatatccatggtgcaaaaagaatgagaaagctcactcagaggaaa
gcagttgattatacaagtacagttgtgcgctatatgcaaatacgtatgtcgcagcgtgat
tcaagagataggacagtactgcagtctacgccagcagcagcaattgatatgttgccagca
gctggctattcagacaatccgtccacaagctttgctgctaaatttgttcatacctctcta
aataaaaatcgttgtcctatcaatcgtgttctttggactcctacaggtcggcgtctcatt
actggctcacagaccggagaatttactctttggaatgggcagtcttttaattttgaaatg
atacttcaggctcatgatcaagcaatcagatccatggtctggagtcacaatgacaactgg
atggtctctggtgatgatggaggagcaataaagtattggcagaacaacatgaacaatgtt
aaagccaacaaatctgctcataaagaatcagtccgtgacttaagtttctgtaggacagat
ttgaagttctgttcgtgttctgatgataccacagttaaagtttgggattttgcacgctgt
caagaagagtgttcattaaccggccatggttgggatgtgaagagtgttgactggcatcca
acaaaatctctattagtatcaggtgggaaagacaatcttgtgaaactttgggatgctaaa
agtgggaaagagctttgctcatttcatggccacaaaaacaccgtgctttgtgtgaaatgg
aatcaaaatggaaactgggtgttaacggcttctaaagatcaaataataaagctttatgac
ataagggcaatgaaagagcttgaatcattccgtggacaccggaaggatgttactactttg
gcttggcatccattccatgaagagtactttgtcagtgggagttatgatggttccatcttc
cattggcttgttgggcatgatactccacaaattgaaatttgcaatgctcatgataataat
gtgtgggatcttgcttggcatcctattggataccttctttgcagtggtagcagcgatcat
acaacgaagttttggtgcagaaacaggccgggagacagtgctcgtgatagatataacaat
ggcatgtcaggatatcctgagcaaaatcctgttggtggtcgcgtgggtggtagttttgca
atacccgaaggccccacaactccagggccatttgcccctgggctgactcgaaatgagggt
accattccaggtgttggagttgcaatgcccctgtctattccttctgttgatgggcctcaa
ggggagcagaagcagccccatcctggttcaatgggtgcgcctcctcttcccccaggtcca
catccctctcttcttaaccccaatcagcaacaaccattccaacagaatccacagcagatt
ccacaacatcagcaccaggcactatcacaacagatgggtcctttgcctatgcctccaaat
atgccacagctacagcatccttcccattctcccatggttcctcaccaacatttgccccgc
cctcccccccaaatgccacatggaatgccaggatctttacaagtgcctacatctcatcca
atgcaaatcccaggacctatggggatgcaaggtggaatgaatcagatgggtcctccaatg
ccacaaggtcattatgtgggcatgaatcaaatgcattcaggtcccttgccagcaagtgga
gggccacctcttggtggtttcccaaacaacatgcaagggccatcaaacaccagttatcct
caaggtgctccatttaacagaccacaaggtgggcaaatgcccatgatgcaagggtataat
ccttaccagtctggaaatcaaccagggatgccaccaaatgcacaaccaggggggccacac
tctcaaatgcctcaataa
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