Pisum sativum (pea): 127075778
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Entry
127075778 CDS
T08598
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
psat
Pisum sativum (pea)
Pathway
psat03018
RNA degradation
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127075778
09123 Folding, sorting and degradation
03018 RNA degradation
127075778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127075778
03041 Spliceosome [BR:
psat03041
]
127075778
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127075778
mRNA degradation factors
5'-3' decay
Lsm complex
127075778
Spliceosome [BR:
psat03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127075778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
127075778
NCBI-ProteinID:
XP_050873203
LinkDB
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Position
4:414735034..414738826
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRSLGLIVCRGTAVMLVSPTDGTDEIANPFIEADGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaggaaggaaactgttctggacttggcgaaattcgttgataaaggagtccaa
gtcaagcttactggtggtagacaagtgacaggtactctaaaaggatacgaccagttactt
aaccttgtcctggatgaagctgttgagtttctgagagatcctgatgatcctctgaaaact
acagatcagacaagaagtcttggcttaattgtttgcaggggaactgctgtgatgcttgtg
tccccaactgatggtacagatgagattgcaaacccctttattgaggcagatggggcctag
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