Pisum sativum (pea): 127075941
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Entry
127075941 CDS
T08598
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
psat
Pisum sativum (pea)
Pathway
psat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127075941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127075941
03036 Chromosome and associated proteins [BR:
psat03036
]
127075941
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127075941
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127075941
mRNA degradation factors
5'-3' decay
Decapping complex
127075941
Chromosome and associated proteins [BR:
psat03036
]
Eukaryotic type
Gene silencing
piRNA pathway
127075941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIA
CMS1
Motif
Other DBs
NCBI-GeneID:
127075941
NCBI-ProteinID:
XP_050873434
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All DBs
Position
4:complement(436412524..436424154)
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AA seq
520 aa
AA seq
DB search
MNNNNRARYPPPGIAPGRGGANPNVNLNQNPNLNHQFQQRPPYHHHNQQQHHQPQQHQPQ
HQQQQYYAQRQMVQQHQQQHQQQQQQQQWLRRAQLGGSESNAAEEVEKSVQSEANDSSSQ
DWKAGLKIPPADTRFRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIA
LTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKH
LKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCILKHCSMLVMDEADKL
LSPEFQPSIQQLIHFLPTNRQILMFSATYPVTVKDFKDRFLNKPYVINLMDELTLKGITQ
FYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD
HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHL
GLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAFYCR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacaatagagcgagatatccacctcccgggatcgctcctggacgcggagga
gcgaatcccaacgtgaatctgaaccagaacccgaacctgaaccatcagtttcagcaaaga
ccaccttaccaccaccataaccaacagcaacatcaccagccgcaacagcaccagccacaa
catcagcagcagcagtactatgcgcagagacaaatggtgcagcaacaccagcagcaacat
cagcagcagcagcagcaacaacagtggctgagaagggcacagttgggtggttcggaatcc
aacgctgccgaggaggtcgagaagtccgtgcagtctgaagccaatgactcaagttctcaa
gactggaaggccggactaaagattccaccagctgatacacgctttaggacagaggatgtt
acagcaactaaaggaaacgaatttgaggattactttttgaaacgggagctgctcatggga
atatatgagaagggttttgaaagaccttcccccatccaagaagaaagcattccaattgct
cttactggcagtgacattcttgccagggctaaaaacggaactggcaaaacagctgcattt
tgcattcctgcattggaaaaaattgatcaggataataatgttattcaagttgttatcttg
gtcccaacacgtgagttggctttgcaaacatctcaagtgtgtaaagagcttggaaagcat
ttgaaaatccaagttatggttacaacaggaggtaccagtctaaaagacgacataatgcgc
ttatatcaaccagttcacctgcttgtcggtaccccaggaaggatattggatcttactaag
aagggtgtttgcattcttaagcattgctcaatgctggttatggacgaggctgataagctt
ctctccccagagttccagccttcgattcagcaactgattcattttcttccaacaaaccgt
caaatcctgatgttttcagcaacatatcctgttactgtgaaggacttcaaagataggttt
cttaacaaaccatatgtcattaaccttatggatgagctcacgctgaagggtattacacaa
ttttatgcatttgtggaagagagacagaaagttcactgcttaaatactctcttttctaag
ctacaaataaaccagtcaattatcttctgcaactcagtgaatcgggttgaactgcttgcc
aagaaaatcactgaactggggtattcatgtttctatattcatgcaaagatgctgcaagac
catcgtaatagagtatttcatgatttccgtaatggtgcatgccgaaatcttgtctgtact
gatctttttactaggggaatagacatccaagcagttaatgttgttataaactttgatttt
cccaagaactcggaaacttatttgcacagggttggtcgttcagggagatttggccacctt
ggtttagcggtgaacttgatcacttacgaggaccgctttaatttatataggattgaacaa
gaacttggcactgaaataaagcaaattccgccacacattgatcaagcattttattgccgg
tga
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