Pisum sativum (pea): 127081251
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Entry
127081251 CDS
T08598
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
psat
Pisum sativum (pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psat03041
]
127081251
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127081251
Spliceosome [BR:
psat03041
]
Complex C
Other components
Complex C specific factors
127081251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_30
AAA_19
HA2_N
ResIII
nSTAND3
AAA_7
RimM
AAA_29
Cas3-like_C_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
127081251
NCBI-ProteinID:
XP_050877481
LinkDB
All DBs
Position
1:complement(440731335..440740324)
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AA seq
697 aa
AA seq
DB search
MAQFWKPGTEKPDAQVVDDEEGGVLFLPGSNSLSSSGYGYASIEKQRQRLPVYKYRTAIL
YLVETHATTIIVGETGSGKTTQIPQYLIEAGWAAGGRLIACTQPRRLAVQAVSSRVAQEM
GVKLGDQVGYTIRFEDVTKQDETVLKFVTDGVLLREMMNDPLLTKYSVIMVDEAHERSIS
TDILLGLLKKIQRRRPELRLIIASATIEAKSMADFFRPRKKRREPETEENGLKVEPAILS
VEGRGFNVQINFAEEPFHDYIQAAVSTVLSIHERESTGDVLVFLTGQDDIDAAAHLLNED
IQTNRKHSGLVVLPLYSGLPRADQELVFSPAPRGKRKVVISTNIAETSLTLEGIVYVVDS
GFSKQRFYNPVSDIENLVVAPISRASARQRAGRAGRVRPGKCYRLYTEEYFLSHMSVEGI
PEIQRSNLVSCVIQLKALGIDNILGFDWPASPSPEAMIRALEVLYSLAILDDDAKLTSPT
GFQIAEIPLDPMISKMIIASSQLGCTEEILTIAAALSVQSIWISGRGIQKESDEAKLRFA
AAEGDHVTFLNVYKGFHLSRKSSQWCHKHFVNYHAMKKVVEVREQLKKIAQRIGLVLKSC
DSDMQVVKKAVTAGFFANACRLEPYSPDGMYKTLRGSEEVYIHPSSVLFRVNPKWVIFNS
LVSTDRKYMRNVMTIDPSWLLEAAPHFYQLQKPNLLH
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctggaagccagggacggaaaagcctgatgctcaggtggtagacgacgaa
gaaggcggtgttctattcttacccggttccaactctctctcttcttctggatatggctac
gctagtatcgagaaacaacgccaacgattacctgtctacaagtaccggaccgccattctc
tacttggtcgagactcacgccaccaccatcatcgtcggtgaaaccggtagtggcaaaacc
actcaaatccctcagtacctgatagaggcgggttgggccgccggtggacgactcattgct
tgtactcaacctagaagacttgctgttcaggctgtttcttctagagttgctcaagagatg
ggagttaaacttggggatcaagttggatacaccataaggtttgaagatgttactaaacaa
gatgaaacggttttaaaatttgtaaccgatggggtgctcctaagggagatgatgaatgat
cctcttttgacaaaatatagtgttataatggtggatgaagctcatgaaaggtccatttca
actgacatcttgcttggactattgaaaaagatccaacggcgtcgaccagagttgcgatta
attattgcatctgctactattgaagccaaatcaatggctgacttcttccgcccaagaaaa
aagcgccgagaacctgaaactgaggagaatggactgaaagttgaacctgcaatcttatca
gtcgagggaagaggcttcaatgtacagattaattttgctgaggaacccttccatgactac
attcaagctgctgtttcaactgttctctcgatccatgagcgggaatccactggagatgtt
ctagtattccttaccggtcaagatgatattgatgctgctgctcatttactcaatgaagac
attcaaactaatcgaaagcactcaggattggttgttttgcctctctattcagggctccca
cgtgctgatcaggagttagtgttttctccagctcctagaggaaagaggaaagtagtaatt
tctactaatatagcagagacatcactcaccttggagggcattgtctatgttgttgacagt
ggattctcaaaacagcggttctacaatccggtttctgatattgaaaatctggttgtggca
ccaatttctagggcatctgctagacaaagagctggtagggctggacgagttcgaccagga
aagtgttacaggctatacacagaagaatattttcttagccacatgtctgttgagggaatt
ccagagatacagagatctaatcttgtctcctgtgtaatccagttaaaggctttgggaatc
gataatatattgggatttgactggccagcatctccatcacctgaagcaatgatccgagca
ctggaagttctctactcacttgcgatcttggatgatgatgccaagcttacttcaccaact
ggatttcaaattgcagaaattccacttgaccctatgatctcaaaaatgataatagcttct
agtcaactcggatgcacagaggagatactcacaattgctgcagcactttcagtccaatct
atctggatctcaggacgagggatacaaaaggaatcagatgaagcaaaattgagatttgct
gctgccgagggtgaccatgtaacatttctaaatgtctacaaaggttttcatctgtctcgg
aaatcatcacagtggtgtcacaagcattttgtgaactaccatgccatgaaaaaggttgtc
gaagttagagaacaactcaaaaaaattgcacagaggataggcttagtcttaaaatcttgc
gacagtgatatgcaggttgttaagaaagcggttactgctggcttttttgctaatgcatgt
cgtcttgaaccatacagtccggacgggatgtacaagacgttaagaggatcagaagaagta
tatattcacccatcatcagtgctattcagagtaaatccaaagtgggttatattcaattct
ctagtatcaactgatcggaaatatatgcgcaatgtgatgacaatagatccctcgtggcta
ttggaagctgctcctcacttctaccagttgcagaaacctaatcttcttcactaa
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