Pisum sativum (pea): 127082744
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Entry
127082744 CDS
T08598
Name
(RefSeq) uncharacterized protein LOC127082744
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
psat
Pisum sativum (pea)
Pathway
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127082744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127082744
03041 Spliceosome [BR:
psat03041
]
127082744
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127082744
Spliceosome [BR:
psat03041
]
Complex B
Other components
Prp19-related factors
127082744
Complex C
127082744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_19
Mad3_BUB1_I
TPR_15
ARM_TT21
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
127082744
NCBI-ProteinID:
XP_050878937
LinkDB
All DBs
Position
1:complement(448785036..448791458)
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AA seq
918 aa
AA seq
DB search
MAISQDLYPSEDDLVYEEELLRNPFSLKLWWRYLIARSDSPFKKRVVIYERALKALPGSY
KLWHAYLRERLEIVRSLPVTHPQFKSLNNTFERALVTMHKMPRVWIMYLQTLTHQKLIAL
TRRNFDRALCALPVTQHDRIWEHYLFFVSQKGIPIETSLRVYRRYLQYDPNHIEDFIEFL
INSSLWQEAAERLASVLNDDRFYSIKGKTKHRLWLELCDLLTRHANEVSGLNVDAIIRGG
IRKFSDEVGRLWTSLAEYYIRRGLHEKARDVFEEGMSTVITVRDFSVIFDSYSQFEESML
AYKMEEMDSDEEDEENEDGENEKEEEEEEEDEDVRFKYEDFEKKIFSGFWLNDKNDIDLR
LARFDYLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKA
VGKPHTLWVAFAKLYEQHNDLANARVILDKAVQVNYKTVDNLASIWCEWAELELKHKNFK
GALELMRRATAEPSVEVKRKVAADGNQPVQMKLHKSLRLWTFYVDLEESLGDLESTRAVY
ERILDLRIATPQVIINYAYFLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKR
YGRTKLERARELFENAVETAPADQVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNNE
KLSMYEIYISRAAEIFGVPKTREIYEQAIESGLPDKDVKAMCLKYAELERSLGEIERARG
IYVFASKFADPRSDPDFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLM
QKDQTVNLDEAKDKLKEAGIPEDEMAALERQLAPAADKSVTKERKVGFVSAGVESQSDGG
IKSNANHEEIELPEENDSDDDDDKIEIAQKDVPSAVFGGLIRKRDEIENDREVDGSAKEK
DNETRLGALERIKKLKRN
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttcgcaggatctctatccatctgaggacgatttggtttacgaagaagagttg
cttcgtaaccctttcagtctcaagctatggtggagatacctaatagctcgctctgattcg
cctttcaaaaagcgcgttgttatttacgaaagagcactcaaagctcttcctggtagctac
aagctgtggcatgcttacctccgcgaacgccttgaaattgttcgcagcctccccgtcact
cacccgcagttcaaaagcctcaacaataccttcgaacgtgcgcttgtaacgatgcataag
atgcctcgtgtttggataatgtatcttcaaacacttactcaccagaaacttatcgctctt
acaagaagaaactttgatagagcactctgtgcacttcctgttactcagcatgatcgaatc
tgggaacattatctgttctttgttagtcaaaagggtatcccaattgaaacctctcttagg
gtttatcgcaggtacttgcagtatgaccctaatcatattgaagattttattgagtttttg
attaattctagtctttggcaagaggctgccgagcggttggcttcagtgttgaatgatgat
aggttttattctattaagggtaaaacaaagcataggctttggttagagttatgtgatttg
ttgactaggcatgcgaatgaagtgtctgggttgaatgtggatgcgattattaggggtggt
attaggaaattctcggatgaggttggtcgactgtggacctcgcttgctgagtattatatt
aggaggggtttgcatgagaaggctagggatgtgtttgaggagggtatgtccactgtcatt
actgtaagggattttagtgtcatatttgattcttactcgcaatttgaagagagtatgctt
gcttataagatggaagagatggatagtgatgaagaagatgaagaaaatgaagatggagag
aatgagaaggaagaggaggaggaggaggaggatgaagacgttcgtttcaaatatgaagac
tttgagaagaagatttttagtgggttttggctgaatgacaaaaatgacattgacttgaga
ttggctcggtttgactacctcatggataggaggcctgaattggctaatagtgtacttttg
cgtcaaaaccctcataatgtagaacaatggcaccggagggtgaaactttttgagggtaac
cccactaagcaaattctcacttacacggaggctgtgaggacagttgatcccatgaaggcg
gtgggaaaacctcatacgttatgggttgccttcgcgaagctttacgaacagcacaacgat
cttgccaatgctcgggttattttggacaaggcagtgcaggtaaactacaaaactgtggat
aatttggctagtatctggtgtgagtgggctgagttagagttgaaacataagaatttcaaa
ggagcacttgagcttatgaggcgggcgactgcagagccatccgttgaggtgaaacgaaaa
gtggcggctgatgggaatcaaccggttcagatgaagcttcataaatctctgagattgtgg
accttttatgttgatttggaagagagtctaggtgatttggagtctactcgggcagtttat
gaacggattttggatttacgaatagccacaccacaagtaataatcaattatgcatacttt
ctggaggagcacaaatactttgaagatgcgttcaaggtttatgaaagaggagtgaagata
tttaagtacccacatgttaaggatatttgggttacatatctgtctaaatttgtgaagaga
tatggaaggacaaaattggaaagagcaagagagctgtttgagaatgcggttgaaacggcc
ccggctgatcaagtgaagcctctctatctgcagtatgctaagctggaggaggattatgga
ctagcaaagcgagctatgaaggtttatgatcaagccacgaaagctgtgcccaacaatgag
aagttgagcatgtatgaaatatacatttctcgcgcagctgagatatttggcgtacccaaa
acacgagagatctatgagcaagcaattgaatctggtcttccagataaggatgtcaaagct
atgtgtttgaagtatgccgagctggaaagaagtttgggagaaattgagcgtgcccgtggt
atatatgtttttgcttcaaagtttgctgatccacggtctgatcccgacttctggaataag
tggcatgaatttgaggttcagcatggaaatgaagatacatttagagaaatgcttcgaatt
aaacggagtgtgtctgcaagctacagccagacacattttatactgccagagtatctgatg
cagaaggatcaaactgtgaatcttgatgaagccaaagacaaacttaaagaggctgggatc
cctgaggatgaaatggctgctttagaaaggcaattagccccagccgctgacaagtcagtg
accaaagagagaaaagttgggtttgtaagtgccggagtggagtcacagtcggacggaggg
ataaagtctaatgcaaaccatgaggaaattgagttacccgaagaaaacgactctgatgat
gatgatgataagattgaaattgctcaaaaagatgtcccttctgctgtttttggcggtttg
attaggaagagagacgagattgaaaatgatagagaagtagatggtagtgcaaaagaaaag
gataatgaaacccggctcggtgctctcgagagaattaagaagctgaaacggaactaa
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