Lathyrus oleraceus (garden pea): 127082791
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Entry
127082791 CDS
T08598
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03030
DNA replication
psat03410
Base excision repair
psat03420
Nucleotide excision repair
psat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127082791
03410 Base excision repair
127082791
03420 Nucleotide excision repair
127082791
03430 Mismatch repair
127082791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psat03032
]
127082791
03036 Chromosome and associated proteins [BR:
psat03036
]
127082791
03400 DNA repair and recombination proteins [BR:
psat03400
]
127082791
DNA replication proteins [BR:
psat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127082791
DNA Replication Termination Factors
ELG1-RFC complex
127082791
Chromosome and associated proteins [BR:
psat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127082791
DNA repair and recombination proteins [BR:
psat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127082791
Check point factors
HRAD17(Rad24)-RFC complex
127082791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
AAA_lid_RFC1
AAA_16
RuvB_N
Mg_chelatase
ADK
SLFN-g3_helicase
AAA_5
AAA_24
AAA_11
AAA_14
nSTAND_NTPase5
DEAD
ResIII
AAA_2
AAA_assoc_2
nSTAND3
AAA_28
AAA_19
PhoH
AAA_30
AAA_25
AAA_7
NPHP3_N
ATPase_2
RNA_helicase
TIP49
AAA_18
NB-ARC
Parvo_NS1
DUF815
Motif
Other DBs
NCBI-GeneID:
127082791
NCBI-ProteinID:
XP_050878983
LinkDB
All DBs
Position
5:198918502..198922804
Genome browser
AA seq
340 aa
AA seq
DB search
MAPIIQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKNGYPCPPYKIIV
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS
SRILYICKEEGIYLDAEGLSTLSTISQGDLRRAITYLQSAARLFGSSISSKDLISVSGIV
PAEVVEALLKACKSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARIS
KKLGEADKCLVDGADEYLQLLGVVSITIQALCNMPEGFAY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaatcatccaaagcactcaaccatgggtcgagaaatatcgcccaaagcaagtg
aaagacgttgctcaccaagaagaagtagttcgagttctcaccaacaccctcgaaaccggt
agttgcccccacatgctcttctatggtcctcccggcaccggaaaaaccaccaccgccctc
gccatcgctcaccagcttttcgggcctgagctttataaatctagggttttggaactaaat
gctagtgatgatcgtggtattaatgttgttcggactaagatcaaggattttgcagctgtg
gctgtcggtaccaatcagcggaagaatggttatccttgtccgccgtataagataattgtt
cttgatgaggcggattcaatgacagaagatgctcagaatgcgctgaggcgtacgatggaa
acttactctaaagttacaaggttcttttttatatgcaactacattagcaggattatagaa
ccacttgcttcaaggtgtgccaaattcaggttcaagccactgacagaagaaatcatgagc
agccgaatattatacatctgcaaagaagaaggaatctaccttgatgctgagggtctttca
accctaagtaccatttctcaaggagatcttcgccgggctataacatacttgcagtccgct
gctcgtttatttggatcttccatctcttcgaaggacctgatttctgtttctgggattgtt
ccggcagaagttgttgaggcacttcttaaagcatgcaaaagtggtaattttgatttagcc
aacaaggaagtcaacaatttcattgcagaggggtatcctgtctctcagatgctaactcag
ttgtttgaggctattgttgaagaaaatgacatatctgatgaacagaaggccagaatatcc
aagaagctgggtgaagcagataagtgcctagttgatggtgctgatgaatacctgcagctt
cttggtgttgttagcattacaatacaggctttatgtaacatgccagaaggatttgcttac
tag
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