KEGG   Lathyrus oleraceus (garden pea): 127082791
Entry
127082791         CDS       T08598                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
psat  Lathyrus oleraceus (garden pea)
Pathway
psat03030  DNA replication
psat03410  Base excision repair
psat03420  Nucleotide excision repair
psat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127082791
   03410 Base excision repair
    127082791
   03420 Nucleotide excision repair
    127082791
   03430 Mismatch repair
    127082791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psat03032]
    127082791
   03036 Chromosome and associated proteins [BR:psat03036]
    127082791
   03400 DNA repair and recombination proteins [BR:psat03400]
    127082791
DNA replication proteins [BR:psat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    127082791
  DNA Replication Termination Factors
   ELG1-RFC complex
    127082791
Chromosome and associated proteins [BR:psat03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    127082791
DNA repair and recombination proteins [BR:psat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     127082791
  Check point factors
   HRAD17(Rad24)-RFC complex
    127082791
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 Rad17 AAA_lid_RFC1 AAA_16 RuvB_N Mg_chelatase ADK SLFN-g3_helicase AAA_5 AAA_24 AAA_11 AAA_14 nSTAND_NTPase5 DEAD ResIII AAA_2 AAA_assoc_2 nSTAND3 AAA_28 AAA_19 PhoH AAA_30 AAA_25 AAA_7 NPHP3_N ATPase_2 RNA_helicase TIP49 AAA_18 NB-ARC Parvo_NS1 DUF815
Other DBs
NCBI-GeneID: 127082791
NCBI-ProteinID: XP_050878983
LinkDB
Position
5:198918502..198922804
AA seq 340 aa
MAPIIQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKNGYPCPPYKIIV
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS
SRILYICKEEGIYLDAEGLSTLSTISQGDLRRAITYLQSAARLFGSSISSKDLISVSGIV
PAEVVEALLKACKSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARIS
KKLGEADKCLVDGADEYLQLLGVVSITIQALCNMPEGFAY
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggcgccaatcatccaaagcactcaaccatgggtcgagaaatatcgcccaaagcaagtg
aaagacgttgctcaccaagaagaagtagttcgagttctcaccaacaccctcgaaaccggt
agttgcccccacatgctcttctatggtcctcccggcaccggaaaaaccaccaccgccctc
gccatcgctcaccagcttttcgggcctgagctttataaatctagggttttggaactaaat
gctagtgatgatcgtggtattaatgttgttcggactaagatcaaggattttgcagctgtg
gctgtcggtaccaatcagcggaagaatggttatccttgtccgccgtataagataattgtt
cttgatgaggcggattcaatgacagaagatgctcagaatgcgctgaggcgtacgatggaa
acttactctaaagttacaaggttcttttttatatgcaactacattagcaggattatagaa
ccacttgcttcaaggtgtgccaaattcaggttcaagccactgacagaagaaatcatgagc
agccgaatattatacatctgcaaagaagaaggaatctaccttgatgctgagggtctttca
accctaagtaccatttctcaaggagatcttcgccgggctataacatacttgcagtccgct
gctcgtttatttggatcttccatctcttcgaaggacctgatttctgtttctgggattgtt
ccggcagaagttgttgaggcacttcttaaagcatgcaaaagtggtaattttgatttagcc
aacaaggaagtcaacaatttcattgcagaggggtatcctgtctctcagatgctaactcag
ttgtttgaggctattgttgaagaaaatgacatatctgatgaacagaaggccagaatatcc
aagaagctgggtgaagcagataagtgcctagttgatggtgctgatgaatacctgcagctt
cttggtgttgttagcattacaatacaggctttatgtaacatgccagaaggatttgcttac
tag

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