KEGG   Lathyrus oleraceus (garden pea): 127083684
Entry
127083684         CDS       T08598                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
psat  Lathyrus oleraceus (garden pea)
Pathway
psat03082  ATP-dependent chromatin remodeling
psat03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127083684
   03083 Polycomb repressive complex
    127083684
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psat03036]
    127083684
Enzymes [BR:psat01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     127083684
Chromosome and associated proteins [BR:psat03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     127083684
   HDAC complexes
    Sin3A-HDAC complex
     127083684
    BRAF-HDAC complex
     127083684
    REST complex
     127083684
    SHIP complex
     127083684
    MiDAC complex
     127083684
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     127083684
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    127083684
  Chromatin remodeling factors
   NuRD complex
    127083684
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 127083684
NCBI-ProteinID: XP_050879973
LinkDB
Position
5:complement(259408380..259414135)
AA seq 481 aa
MGSGEMGVAESDGASLPSIGADAMKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLVI
HYALHRRMQINRPFLAGPEDIRRFHADDYVDFLASVSPEILSENSHSHYRQLKRFNVGED
CPVFDGLFPFCQASAGGSIGAAVRLNRGDADIAINWAGGLHHAKKAEASGFCYVNDIVLG
ILELLKVHRRVVYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDTGVGSG
KDYAVNVPLNDGMDDENFRALFRPIMQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLSVK
GHADCLRFLRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPSNKLPYNEYYEYFGP
DYTLHVEPNNMENLNTPKDMEKIRNMLLEQISRLPHAPSAPFQTTPPVIQVPEEEDEDMD
IRPKPRIWNGDDYDSEDDDEYEDEKASIRSLNLSARMRRSAVDMEEDKPVVKPDVHSSSS
S
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgggtagcggtgaaatgggagttgcagagagcgacggtgcgtcactaccgtcaatcgga
gccgacgcaatgaagcgaagagtaacctacttctacgaaccaacaatcggcgattactac
tacggtcaaggccacccaatgaaaccccaccgaatacgcatggctcataacctcgtcatc
cactacgcacttcaccgtcgtatgcaaatcaaccgtcctttcctcgccggtcccgaagac
atccgccgttttcacgccgacgactacgtcgacttccttgcctccgtttcgcctgagatt
ctctccgagaattctcactctcactaccgtcaactcaagcggttcaatgttggtgaagat
tgtcccgttttcgatggactttttccgttctgccaggcctctgctggtggatccattggt
gctgctgttagacttaaccgcggtgatgctgatattgctatcaattgggctggagggttg
catcatgctaagaaagctgaagcctcggggttttgctatgttaatgacattgttcttggt
attctcgagcttcttaaagttcataggcgtgtggtgtatgttgatattgatgtccaccac
ggagatggtgttgaggaggcattttacactactgatagagtgatgacagtgtcttttcac
aagtttggcgattttttcccgggaactgggcatattaaagacactggggtgggctctgga
aaagactatgctgtaaatgttcctttgaatgatggaatggatgatgagaatttccgcgct
ctgttccgtcccatcatgcaaaaagtcatggacgtttatcaacccgatgcagttgttctt
caatgtggagctgattcattgtctggtgataggttgggttgcttcaacttgtctgtgaag
ggtcatgcagactgccttcggttccttagatctttcaatgttcctctaatggtcttgggt
gggggaggatacacagtacggaatgttgctcgttgttggtgttatgagacagcagtggca
gtaggagtggagcctagtaataagttgccatacaacgagtattatgaatattttggccca
gactatacacttcacgttgaaccaaacaacatggagaacctaaacacacccaaggatatg
gaaaagatcaggaacatgttacttgaacaaatttccagacttcctcatgcacccagtgca
ccttttcaaacaacaccgccagttatacaagttccagaagaggaagacgaggacatggat
ataagaccaaaacctcgcatatggaatggtgacgattatgattctgaagacgatgatgaa
tatgaagatgagaaggccagtataaggagcttaaatttatctgcccgtatgaggcgttca
gcagttgatatggaagaagacaagccagtagttaagcctgacgtgcattcgtcctcgtcg
tcctaa

DBGET integrated database retrieval system