Pisum sativum (pea): 127083959
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Entry
127083959 CDS
T08598
Name
(RefSeq) nuclear pore complex protein NUP88
KO
K14318
nuclear pore complex protein Nup88
Organism
psat
Pisum sativum (pea)
Pathway
psat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127083959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127083959
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127083959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
Motif
Other DBs
NCBI-GeneID:
127083959
NCBI-ProteinID:
XP_050880280
LinkDB
All DBs
Position
5:complement(288629145..288635491)
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AA seq
803 aa
AA seq
DB search
MRMTVEPSYSPSPTPKEELEWLPLPKHPLFTTTISHDATGNVSRNLLAWDGANRLYFWDP
HNNRLHRLSLRLGDPDPTSVLAASPSKVLQTDVVLDFDVHKISINRNGTAILLFGSEKLC
VMYLYGRTSKKDVNLICRTIAVGSQTHSLGNNDIRVLEASWHPYSDTHLGILSSDSVFRL
FNLAVDPLQPEQEYYLQPAVHGRSRTASSMCPVGFSFGGDHLWDRFSVFVAFSDGSIYVI
CPVVPFGSLFKCESLLDIYNDAHTFGLMSANSVAASNSKLAISWLEATFPELQNQESEGD
NLSLLRSHAYVVFDASLVLQGPLQRVGQSGNGDSVGRSAECEGRAVSFLYNSVSKDSILV
TAWSGGQLQIDALADEIQPVWSIGSPPRLRLDSHDEILGLAMICESTASSPPEKLDHNNA
WLGNPSPLLRLAIVDLALPRRAAERGYNISLFIDTLMPERIYSIHDGGIDSIVLHCLPFT
SQANGKDDTMRTPSVHPVLNTCQNGSTSEPSLCGFVSLSDSFGYSWSVAVTLSQECVVLE
MKTWNLLPQLSIDMEKKHIQSVGQSNERDIQPIISKELLSGPKEVLVPWASQSLRSVAAD
SIEGRSTLHQYFKLFHETYVEYAHKVHLELKHHAPQLKKIISDQRSRLGDAQQKLLKVED
KECILQKRIDRAIQMHNSLEERLQHLRNLPGAHKKPLSRAERQFKSELDHFKEVELDALH
SSVEAVSARLRRHMQASKAIQQKKISGKKVCAGNDQISILKSSLEKLSLVNTENSKKVKI
VESTLSNKERNSGESSLPMLKNC
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgacagtggagccaagctactccccaagcccaactcccaaagaagaactcgaa
tggctcccactaccaaaacaccctctcttcaccaccaccatctctcacgacgctaccggc
aacgtttcccgaaacctactagcttgggacggagccaatcgtctctatttctgggacccc
cacaataaccgccttcatcgtttatctctccgcctcggtgatcctgatcctacttccgtt
ctcgccgcttctccctctaaggtgttgcaaacagatgttgtgctcgattttgatgtgcac
aaaatctccatcaataggaatggaacagcgatacttctttttggttctgaaaaactctgt
gttatgtatctatatggacgcacatccaagaaggatgtaaatttgatttgcaggaccatt
gctgttggttctcagacacattcccttggaaacaatgatattcgtgtattggaagcgtca
tggcacccttacagtgatactcatttgggaatcctttcttctgactcagtttttaggctt
ttcaatctggctgtggatcctttgcaaccagagcaagaatactatttacagcctgctgtg
catggtagatccagaactgcctcatcaatgtgtccagttggtttttcttttgggggagat
catttgtgggacaggtttagtgtttttgttgcattcagtgacgggtctatctatgtaatt
tgccctgttgttccatttggaagtctattcaaatgtgaatctttattagacatatacaat
gacgcacatacatttgggctaatgtcagccaactctgtagcggctagtaattcaaagttg
gcaatctcctggctagaagcaacatttcctgagttacagaaccaagaaagtgaaggagac
aacttatctttgctaagatctcatgcttatgtagtatttgacgcatctcttgtcttgcag
ggacctctgcaaagagtaggtcagagtggaaatggagattcagttggtcgcagtgctgaa
tgtgagggtcgtgcagttagttttctctacaattcagttagcaaagattctatcttggtg
actgcctggagtggggggcaattacagatagatgctctagctgatgagatccaacctgtc
tggagtattggtagtccacctcgtcttcgtcttgactcccatgacgaaatacttggcctt
gctatgatctgtgagtcaactgccagcagtcccccggagaaacttgatcataataatgcc
tggttgggtaatccatcccctctgctgagactggctattgttgatttggctctgccacga
agagcagcagaaaggggttataatatttcattgttcattgataccctcatgccagagaga
atatattccattcatgatggagggattgactcaatagtgttgcattgtcttccatttaca
agtcaggcaaatggaaaggatgatacaatgaggacaccttctgtacatcctgttctaaat
acatgtcagaatggatccacttcagagccttcactttgtggttttgtgtcattgtctgat
tcatttggatattcctggagtgtggctgttactctttctcaagaatgtgttgtgcttgag
atgaaaacttggaaccttttgcctcaattaagcatcgatatggagaagaagcacattcaa
tcagtggggcaatcaaatgagagagatattcaaccaataattagcaaagaactgcttagt
gggcccaaggaggtacttgttccttgggcctctcaaagtttacgctcagttgcagctgat
tcaattgaaggccgatcaacattgcatcagtatttcaagctatttcatgagacttatgtg
gaatatgctcataaggtgcacctggaactcaagcatcatgcacctcagttgaagaaaatc
attagtgaccaacgttctcgattaggtgatgcacagcagaaacttttgaaagttgaagat
aaagagtgtatattacagaaaagaattgatcgtgcaattcaaatgcacaattctttggaa
gagcgcttacaacatttaaggaacttacctggtgctcacaaaaaaccattgtctagagca
gagcgacagtttaagtctgaacttgatcacttcaaggaagttgagttggatgctttgcat
tcttctgttgaagcggtaagtgccagactgagaaggcacatgcaagcttcgaaagctatt
caacagaagaaaatatcagggaagaaagtttgtgctggaaatgatcagatatcaatactc
aaatcatcacttgaaaaactgtcacttgtaaatactgaaaattcgaagaaagttaagatt
gttgaatccacattgagtaacaaagaaagaaacagcggagaatcaagtctgcctatgctt
aaaaactgttag
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