Pisum sativum (pea): 127084013
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Entry
127084013 CDS
T08598
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
psat
Pisum sativum (pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psat03009
]
127084013
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127084013
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
Pre-60S particles
Helicases
127084013
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
127084013
NCBI-ProteinID:
XP_050880339
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All DBs
Position
5:complement(293137680..293142846)
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AA seq
589 aa
AA seq
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MDSEFPNKALTTTRFSDLKPPLSDPVLQALTHSAFDFCTPVQAATIPLLCSFKDVAVDAA
TGSGKTLAFVIPLVEILRRSSSNPKPHQVLGIIISPTRELASQIYHVAQPFISTLANVKS
MLLVGGVEVKTDMQKIEEEGANVLIGTPGRLHDIMNRMDVMDFKSFEILILDEADRLLDM
GFQKQINAIITQLPKLRRTGLFSATQTQAVEELAKAGLRNPVRVEVRAETKTANGAAASN
QLESSKTPSGLHTEYLKCEADKKPSQLVDFLIKNRSKKIIIYYMTCACVDYWGVVLPRLS
VLKDFSLISLHGKMKQTVREKALASFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQD
PNVFVHRVGRTARLGKQGHAVIFLLPKEESYVEFLRIRRIPLQERTCSDNAPDVIPEIRT
AATKDRDVMEKGVRAFVSYIRAYKEHHCSYILRWKELEIGKLATGHGLLQLPLVPEVKRH
SLSTEGFEPVKDIKFEDIKFRDKSREKQRKKNLQTKKEAKEKEPKPKKLKKTPNVPDVMR
KKTAKQRRAQQTVEDDEELTQEYRLLKKLKKGVIDEDEYAKLTGTEDLL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggattccgagtttcccaacaaagcattaaccaccactcgcttttccgacctcaaaccc
ccactttccgatcccgttctccaagccctcacacactccgccttcgatttctgcactccc
gttcaagctgccactattcccttactctgcagcttcaaagacgtcgctgtcgacgccgcc
accggttccggcaaaaccctagctttcgtcattccacttgtcgagattcttcgtcgctcc
tcttccaatcccaaacctcaccaggttctggggataattatatctcctacaagggaacta
gcatcccaaatatatcatgttgcacaaccttttatttcaaccttagcgaatgttaaatca
atgctactagtaggtggagtggaagtgaaaaccgacatgcagaaaattgaggaagaaggt
gcaaatgtattgattggcacgccgggtcgattgcacgacattatgaataggatggatgtt
atggatttcaaaagttttgagattttgattctggacgaggctgataggctcttagatatg
ggattccagaagcagataaatgctatcataactcagttacctaagcttcgaaggactggt
ttattctcggctactcaaactcaggctgtggaagagcttgccaaagcagggttgaggaat
cctgtgcgggttgaagttcgagcggaaacaaaaactgcaaatggtgctgcagcatcaaat
caactagaatcttcaaagacaccttcaggtcttcacactgagtacttgaaatgcgaggct
gataagaagccgtcgcagctagtagatttccttattaagaaccgctcaaaaaaaattata
atatattacatgacttgtgcttgtgttgactattggggagttgttcttcctcgcctttct
gttttgaaagacttctccttgatttctcttcatggaaagatgaagcagactgtgagggag
aaggcactagcttcatttacatccctctcaaatggaattcttctgtgtacggatgttgca
gcacgtggacttgacatacctggcgttgactgtatagtgcagtatgatcctcctcaagac
ccaaatgttttcgtacatagggttggtcgaactgctcggctgggtaaacaaggacatgcg
gttatcttcttattaccaaaggaggaatcttatgtagaattcttgcgtataagaagaatt
ccacttcaagaaagaacatgctccgacaatgcacctgatgttatacccgagattcgtact
gcggcaacaaaagatcgcgatgtcatggagaagggagtcagggcatttgtttcttacatt
cgggcttataaagagcatcactgctcttatattctcaggtggaaagaacttgagattggc
aaattagccacaggacatggcttattgcaacttcctttagtgccggaggtaaaacgccac
tcactatccactgaggggtttgaacctgtgaaagatatcaaattcgaggacattaagttc
agggataaatcaagggagaaacaaaggaagaaaaatctgcaaacaaagaaagaagccaaa
gagaaagagccaaaacctaaaaagctaaagaaaactcccaatgtacccgatgtcatgagg
aagaaaacagccaaacaaagacgtgctcagcagactgttgaagacgatgaggagttgacg
caagaataccgcttgttgaagaaattgaagaaaggggtcatagatgaggatgaatatgcc
aaattgacaggcacagaagacttactttga
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