Lathyrus oleraceus (garden pea): 127084020
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Entry
127084020 CDS
T08598
Name
(RefSeq) SNF2 domain-containing protein CLASSY 2-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127084020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psat03400
]
127084020
DNA repair and recombination proteins [BR:
psat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
127084020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
127084020
NCBI-ProteinID:
XP_050880346
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All DBs
Position
5:complement(293452107..293456948)
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AA seq
1264 aa
AA seq
DB search
MAPSRKRNLHQWKHPFDADYPFEAVLSGSWQPVKLIKVESGKTTLHFMNSQQIQSPLSSS
SDIRIGSRKATSSDCSNFLRSGIDISMLLGFRHYDDNSYQFSPIPMWIDARINSIHRQPH
GESDKCSCQFYVNFYDGQGSLGTEMKTLSKDDNAIGIDQIFILQRLQHNASEGLLKENKS
SEVKPYRWDSSEDCSSLSQSRLILGKFLSDLSWFVMTSFIKKVSFSIRSFQNKLVYQVMG
NDTDVTSPFVIDVVNFKLKKGSLVPIISQFDAFHDYDGEEDETSPMLSNEIGGIRRSKRR
NVQPERYVGCAVEKLEVGSFRTWPYKRGTYVKKNENSSSDSDSDLEVDDSESDEKVNEAE
KTNEVKLGDVEQNDHVDEISSKYDNLTNAIVEAKNNGDDALNLDPSNDQSAISCVEEVDD
NVTLGRYYSYCREKLKRKQLHHGLDDIDFGNKWEGILFQKGAQTKRFHWTNISQVHEQQH
HKGSRTSNADASKEIIDTYMKNFYSLPTEDEENVNEPLQETSQLEEKEEENISNSDDEEE
ESPENLGALWEEMDSALTSSYLLNGNEGSNAAEVSTDTEKESKEACEHDFRLDEEIGIYC
IRCGFVKTAIRDISEPIMESSKWHKDEKKCSREDKEEKSEPKVVEVDNKDLFRTHANDLD
EPISNENQNVWELIPELKEKMHAHQKKAFEFLWRNIAGSMEPALMKENSETSGGCVISHA
PGAGKTFLIISFLVSYLKLFPGKRPLVLAPKTTLYTWRKEFKKWKIPVPVYLIHARRTSR
HLATLKPTILPGVPKASSDVKHVLDCINKIQKWNSHPSVLIMGYTSFLSLMRSEESKFAH
RKYMAKALRENPGMLILDEGHNPRSTKSRLRKCLMKLPTELRILLSGTLFQNNFCEYFNT
LCLARPKFVHEVLQELDSKYRKNGEIVKKAPHLLETRARKFFLDNIEKKINSDIDEEKML
GLHLLRKITTSFIDVYDSGNSSDTLPGLQIYTLLMNTSDEQCEIIQKLQKKMAESTSYLL
EVELLITLGSIHPWLIKTAAACAAKFFGDEELKKLETSKFDLRKGSKVRFVLSLISRVVK
NEKVLIFCHNLAPVRFLIELFEKYFQWQNGKEILLLTGELDLFERGKVIDKFEDPRGSSK
ILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLTNGSL
EEDKHRRTAWKEWISCMIFSQEFVEDPSKWQAEKIEDNILREMVEEDKSKAIHMIMKNEK
ASTT
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggcgccatcaagaaaaaggaatttacatcaatggaagcatccattcgatgctgattat
ccatttgaagcagtattgtctggctcatggcaacctgtgaaactcattaaagttgagtcc
ggaaaaactaccttacatttcatgaattctcaacagattcaaagtcctttgtcatcatca
tccgatattcggataggatcaagaaaagctacttcatctgattgctccaactttctacga
tctggaattgacatatctatgctattaggctttcgtcactatgatgataactcatatcaa
tttagtcctattccaatgtggatcgatgctaggataaattccatacacagacaacctcac
ggcgaatctgataaatgttcgtgtcaattttatgtgaacttctatgatggtcaaggttcg
cttggaaccgagatgaaaactcttagtaaagatgataacgcaattggaatcgaccaaatt
tttatcctccagaggcttcaacataatgcttctgaaggtctgttaaaagaaaataagagt
tctgaagttaagccttataggtgggattcatcggaagattgctcttcattatcgcaatct
agattgattctcgggaagtttttatctgatctttcgtggttcgttatgacgtctttcata
aagaaggtttcgttcagtataagatcttttcaaaacaagcttgtgtatcaagttatggga
aatgatactgatgttactagtccttttgtgatagatgttgtgaacttcaaacttaaaaag
ggatcgctagtacctattatttctcaatttgacgcgtttcatgattatgacggtgaagaa
gatgaaacgtcgccaatgctgtctaatgagattggaggcataagacgctcgaaacgtagg
aatgtacagcccgaacgttacgtaggctgtgcggttgagaagttggaagttggtagcttt
agaacatggccatacaagagaggaacttatgtgaaaaaaaatgaaaactcttcttcagat
tcagattcagatttagaagtggatgatagtgaaagtgacgaaaaggttaatgaggcggag
aaaaccaatgaagtaaagttaggtgatgtcgaacaaaatgatcatgtagatgaaatttct
tcaaaatacgataatttgactaatgccatcgttgaagcaaagaataatggtgatgatgcg
ttgaatttggatccctccaatgatcagtctgcaatatcgtgcgttgaagaagtcgatgat
aatgtcactttgggacgttattatagttattgcagagaaaaacttaagaggaagcaactt
catcatggtttggacgatatcgattttggaaacaaatgggaagggattcttttccaaaag
ggcgctcaaacaaaaagatttcattggacaaacataagtcaggttcatgaacaacagcac
cataaaggcagtagaacgtcaaacgccgatgcctccaaggaaataatcgatacatatatg
aagaatttctatagtctgccaactgaagacgaggaaaacgttaacgagccgttgcaggaa
acaagccagttggaggagaaggaggaagaaaacatatcgaatagcgatgacgaggaggaa
gagagtcctgagaatttgggagccctgtgggaagaaatggattcagctttgacatcaagt
tatcttcttaatgggaatgagggttcaaatgctgctgaggtttcgactgataccgagaaa
gaatccaaggaagcttgtgaacatgattttagattggatgaagaaatcggaatatactgc
attcgatgtggttttgtgaaaaccgcaatacgagacatttctgaacccattatggaaagt
tcgaaatggcacaaagatgagaaaaaatgcagtagagaagataaggaagagaaatcagag
ccaaaagttgttgaagttgataataaggatctgttcagaactcatgctaatgatcttgat
gaaccaatatcgaacgaaaatcaaaatgtttgggaattgattccagaactcaaagaaaag
atgcatgcacaccagaaaaaggcttttgagtttctttggcgaaacattgcaggatcaatg
gaaccagcactgatgaaagaaaattctgaaacaagtggtggctgtgttatatctcatgct
cccggagcaggaaaaacgtttctcatcatttcgtttctcgtaagttacttgaaattgttt
ccagggaaaagaccattagtcctagctccgaaaaccacactctacacatggcgaaaagag
ttcaagaaatggaagattcctgtgccggtgtatcttattcacgcccgtcgaacctcgaga
cacttagcgacgctaaaaccaacgattcttccgggagttccaaaagcttctagtgatgtc
aaacatgttttggattgtatcaacaagatacagaaatggaattcacaccctagtgttctt
atcatgggctatacttcgtttttatcgttaatgagatcggaagaatcgaaatttgcacac
agaaaatacatggcaaaagcattgagagaaaacccgggaatgttgatacttgatgaagga
cacaatcctagaagcacaaaatcaaggttgaggaaatgtttaatgaaacttccaacagaa
ttaaggatactactttcaggcacattgtttcagaacaatttctgcgaatatttcaacacg
ctttgcttagctagaccgaaattcgttcacgaagttctccaagagttggattctaaatac
agaaagaatggagaaatagtgaagaaagcaccgcatttactcgagacgagagcgaggaaa
ttcttcttggataacattgaaaagaaaattaactcggatattgatgaagaaaaaatgctc
ggtctacacctgctgcgaaaaatcaccaccagttttattgatgtttatgacagtggaaat
tcttctgatactcttcctggtttacagatctatacattgctcatgaacacgagcgatgaa
caatgcgagataatacagaaacttcagaagaaaatggctgagtccactagttatcttctc
gaggttgaacttctgataacactcggatcgatacatccgtggttgatcaaaacagcagca
gcatgtgcagctaagtttttcggcgatgaagaactgaagaagctagaaacaagcaaattc
gatttgagaaaaggttccaaagtaagatttgttctgagcctaatctcgcgcgtagtgaaa
aacgaaaaggttcttatcttttgtcacaatctcgcaccagtgaggtttttaatcgagtta
ttcgagaaatactttcagtggcaaaacggtaaagagattctgttacttaccggcgaacta
gacttgtttgaaagaggcaaagtgatagataaattcgaagatcctcgcggaagttcgaag
atacttcttgcttcaatcaatgcttgtgctgaaggtataagtctaacggcagcgtctagg
gtgatttttttggattctgagtggaatccttcgaaaacaaagcaagctattgcgcgcgct
tttcgtccgggtcagcagaaaatggtttacgtgtatcagttattgacaaacggatcgttg
gaggaagataagcacagaagaactgcatggaaagagtggatttcttgcatgatatttagt
caagagtttgtcgaagatccttcgaaatggcaggctgaaaagatcgaagataatatactt
agggagatggttgaagaagataagtctaaagccattcatatgattatgaagaatgaaaaa
gcttcaacaacctaa
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