Lathyrus oleraceus (garden pea): 127084051
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Entry
127084051 CDS
T08598
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127084051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127084051
Enzymes [BR:
psat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
127084051
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
127084051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
127084051
NCBI-ProteinID:
XP_050880381
LinkDB
All DBs
Position
5:54491716..54498952
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AA seq
730 aa
AA seq
DB search
MAVSGSPVGGSTPPPPPPPPQEQANKLGFTKPISLAGPTTADLHRNAELEKFLVDSGLYE
SNEESASRQEVLRRLDQIVKSWVKLLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVD
IDTLCIGPSYVNREDFFIILHNILAEMEEVTELQPVPDAHVPVMKFKFQGISIDLLYASI
SILVVPEELDISDGSILHDVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKR
RGVYSNVTGFLGGVNWAILVARVCQFYPNAIPSMLVSRFFRVYSQWRWPNPVMLCSIEEN
EPYLPIWDPRRNPRDRFHLMPIITPAYPCMNSSYNVSTSTLRVMMEQFQHGNKICDEIEL
NKSQWSALFKPYVFFEAYKNYLQVDIVALDADDLLLWRGWVESRLRQLTLKIERDTHGML
QCHPYPHEYADASKPCPHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEISMYVYWKP
GMEIYVSHVRRKQLPAFVFPDGYKRTRMPRHMSHAAEKTRECTTKCYSGSSSSERCIKRK
NSHEMVDVKPDKPEKRTSVSPQRLECVSPESCTSKLDGTPQISIECIEGVRPDGSTTKDA
DRNCEIKSSHRLLGSDTIIEVGDMQINETCFVDSTHDRLKSRDLEVQNENGVNGDKALDL
SFVCLERAETTSSKCLTNWEESAVKMDQQLDKACNFTRAECSDYAPSASTQNLNCEVLHH
YTCYVSSNCA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccggtagtcctgttggtggttccacacctccaccgccgccgccgccacca
caagaacaagctaacaagcttggattcacaaaacctatctctcttgctggtcccacgact
gctgatcttcatcgtaacgccgaattggagaagtttttggttgattcgggtctttacgag
agcaatgaagaatctgctagcagacaagaggttcttcgccgtttagatcagattgttaaa
agctgggtgaagctgttgacccgccaacgaggctacacagatcagatggttgaggatgca
aatgcggtcattttcacttttggctcttaccgattaggggttcatggacctggagtggac
atagacactttgtgcattggtccttcttatgtaaatcgagaggacttcttcatcattttg
cataacatcctggctgaaatggaagaagttactgaacttcaaccggttcctgatgcacat
gtcccagttatgaaattcaagttccagggaatttctatagatttgctgtatgcaagtata
tctattttggttgtgccagaagagctggatatctcagacggttccattttgcatgatgtt
gatgaacaaactgttcgaagtcttaatggctgccgtgtggcggatcaaattcttaaactt
gttccaaatgtcgagcacttccgaactaccctgcgttgcttaaagttttgggctaaaaga
cgcggtgtttattcaaatgttactggattccttggaggtgtaaattgggctattttagtt
gctagagtttgccagttttaccctaatgcaatccctagtatgttggtttctagattcttc
agggtctattcacagtggcggtggccaaaccctgtaatgttgtgctctatagaagagaat
gaaccatatctccctatatgggatcctcgcagaaaccctagggaccggtttcaccttatg
ccaataattactcctgcatacccttgcatgaattccagctacaatgtctcgacaagcact
ctacgtgttatgatggaacagttccaacatggcaacaagatttgtgacgaaattgagctt
aacaaatcacagtggagtgcactttttaagccatatgtcttttttgaggcatacaaaaac
tatttacaagtagacatagttgcgttagatgctgatgatttacttttatggaggggttgg
gtagaatcccgactgagacagctaaccttgaagatagagcgagacacacatgggatgctg
cagtgtcatccttatccacacgagtatgcagatgcgtccaagccttgtccgcattctgca
tttttcatgggcttgcaaagaaaagagggagtaagaggtcaagaaggtcagcaatttgac
atacgtggaacggttgacgaattcagacaagaaattagtatgtacgtatactggaagccg
gggatggaaatttatgtttctcatgttcgtcgaaagcagctccctgcatttgtttttcca
gatggctacaaacgtactcgaatgccgaggcatatgagccatgcagccgagaaaacgagg
gaatgtaccacaaagtgctactctggatctagctcttctgaaaggtgcatcaagaggaag
aatagccatgaaatggtggatgtgaagccagataaaccagagaagcggacatctgttagc
ccacagaggctagaatgtgtttcacctgaaagttgtactagtaaattggacggtacacct
caaataagtattgagtgtattgaaggggttaggccagatggctcaacaacgaaggacgcc
gacagaaattgtgaaatcaagtcatctcatagactcttaggaagtgatacaattattgaa
gtaggtgacatgcagataaatgaaacatgttttgttgactccacacatgataggctgaaa
tcaagggatttagaagttcagaatgagaatggagtcaacggggacaaagctctggacctg
tcttttgtttgcttggaaagggcagaaactacatcttcaaaatgcttgacaaactgggaa
gagagtgctgttaaaatggatcaacaactagacaaagcttgtaatttcacaagggctgaa
tgttcagattatgcaccaagtgccagcacccagaacctcaattgcgaggtcttgcaccac
tatacgtgctatgtttccagtaactgtgcttaa
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