Pisum sativum (pea): 127084080
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Entry
127084080 CDS
T08598
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
psat
Pisum sativum (pea)
Pathway
psat03022
Basal transcription factors
psat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127084080
09124 Replication and repair
03420 Nucleotide excision repair
127084080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psat03021
]
127084080
03400 DNA repair and recombination proteins [BR:
psat03400
]
127084080
Transcription machinery [BR:
psat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127084080
DNA repair and recombination proteins [BR:
psat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127084080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
127084080
NCBI-ProteinID:
XP_050880427
LinkDB
All DBs
Position
5:296664197..296670483
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AA seq
297 aa
AA seq
DB search
MPSAPSKNYTDDVSLLVVTLDTNPFFWSDFPSHFSDFLSQVLAFLNSIILLGQLNQVVVI
ATGCNSCSYVYDSSSNKNHASTNGTMPALYSNLLHNLDEFIANDKQLTKAHEPGTVPSSL
LSGSLSKALCYIQRAFRSGPMHPQPRILCLQGSPDGPEQYVAIMNAIFSAQRSSVPVDSC
YIASSNSSNSAFLQQASYITGGIYYKPPQLDGLFQYLSAVFATDLHSRAFLRLPKSLGVD
FRASCFCHKKTIDTGYVCSVCLSIFCEHHDKCSTCSSVFGQSQSVAASTDNRKRKAE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgctccttcaaaaaattacacagatgacgtcagcctcctcgtcgtcacactc
gacaccaaccctttcttctggtccgatttcccctcccacttctccgacttcctctctcaa
gttctcgcttttctcaattcaattatcctcctcggccaactcaaccaagtcgtagttatt
gccaccggttgcaattcatgttcctacgtttacgattcatcttctaataagaaccatgct
tccactaacggcacaatgcccgcactttattccaaccttcttcacaatctcgacgaattc
atagctaacgataagcaattaacaaaggctcatgaaccgggaaccgttccttcgtcactc
ttatctggatcattgtccaaggctctatgctatatacagagagcttttcgatcaggacca
atgcatcctcagcctcggattctctgtctgcaaggatctcccgatgggcctgaacaatac
gtggcaatcatgaatgcaatattctctgctcagcgttcttcagttccagtagattcttgt
tatattgcttcaagcaattcaagcaattctgcattcctccagcaggcttcatacataact
ggtggcatatattataagcctccccaattggatgggctttttcaatatctttcagcagtg
tttgcaactgatttgcattctcgtgcatttttaaggcttcctaaatctctgggtgtggat
ttccgtgcctcgtgtttctgccataagaaaacaatcgacacgggctatgtatgttctgta
tgcttatccatattctgtgagcatcacgacaagtgttcaacttgtagctctgtttttggc
cagtctcaatctgttgccgcctcaacagacaatcggaaaagaaaggctgaataa
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