Lathyrus oleraceus (garden pea): 127084234
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Entry
127084234 CDS
T08598
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127084234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psat03021
]
127084234
03036 Chromosome and associated proteins [BR:
psat03036
]
127084234
Transcription machinery [BR:
psat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127084234
Chromosome and associated proteins [BR:
psat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127084234
PBAF complex
127084234
GBAF(ncBAF) complex
127084234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
127084234
NCBI-ProteinID:
XP_050880603
LinkDB
All DBs
Position
5:complement(311559816..311562282)
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AA seq
542 aa
AA seq
DB search
MNNNNNNQGNNFAASSSLFGRSATTPLSHQQQYPNLMSHQQQWAHVLSRSHPQSQFHGNF
QFAESQSQPQAALQAHYAQLQAQAAYASLQSSQAQPVTPFRNAGNTNVASTPVTGSSKRA
ASQRNSLRTPGSSGVNQNVSDNKTADLTPGSRRRKRELPEKQVAAILPESALYTQLLDFE
AQIDAALAKKKVDMQEAIRCPAHVQKTLRMYVFNTFSNRSKADSEDIIAEESSWSLKIIG
RVLEDGNVPVSGNSQRSSPSDAKFSDFFKKVTICLDQNLYPENHIIVWDSARSPKQQDGF
EVKRKGDKEFTAVIKIDLKYSPEKFMVSEPLSKLLGIEVESRPRIIAALWHYVKSRRLQC
PDEPSFFICDPSLQRIFGAEKMGFPLAAQKLLDHLSQPKPIYLEHNIKLSGDCPAGTACY
DVQVDVPIPLQKEMSGFLASNSVDSHKEIEASDEIISSNLKKIQEHRRRRAFFLSFSQSP
SEFINTMIASRSKDPKPAAGDAGCNSNKEQQHPEFYNQPWAEDAVIRYLNRKAAGRDVPD
GN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataataataatcaagggaataattttgctgcatcatcatcattgtttggt
cgttctgcaacaacaccactgtcacatcagcagcagtaccctaacctcatgagccatcag
cagcaatgggcgcatgttctgtctagatcacaccctcaatcccaatttcatggtaatttt
cagtttgcggaatcccaatcgcaacctcaagcggcgctgcaagctcattatgcgcaattg
caagctcaggctgcatatgcttctttacaatcctctcaagctcaacctgttactccgttc
cgtaatgctggtaatactaatgttgcgtcgactccggttactggaagctcgaagcgagca
gcgtctcaaaggaactctttgcggactccaggttcgtctggcgtgaaccaaaatgtgtct
gataataagactgcggatttgactcctggttctcggcgaaggaagagggagttaccggag
aagcaagtggctgcaattctgcctgagtctgctctttatactcaattgcttgattttgaa
gctcagatcgatgctgcgttggctaagaaaaaggttgatatgcaggaggctattagatgc
cctgcccatgttcagaaaactcttagaatgtatgtgtttaatacgttctcgaatcgctca
aaagctgactctgaggatataattgccgaggaatcttcttggtctctgaagataattgga
agggtattggaagatggtaatgttcctgtgtctggaaattcgcagagatcgagtccttct
gatgcaaaattctctgatttcttcaagaaagttaccatttgcttggatcagaacctctat
cctgaaaaccacatcattgtgtgggacagtgctcgctcgcctaaacaacaggatggtttt
gaggtgaagaggaaaggagacaaagaattcactgcagtgatcaaaatagatttgaaatat
tcacccgagaaattcatggtctcggaaccattgtcgaaacttttagggattgaggtcgag
agtcgcccgagaataatagctgctctttggcattatgtgaagtccaggaggctacaatgt
ccggacgagccttccttcttcatctgtgatccttccctccaaaggattttcggggcagag
aagatgggattccccctggctgctcagaagttgttagaccatttgtcgcaaccaaagcct
atatatttggagcataacatcaagctttctggagactgtcctgctggaactgcatgttac
gacgtacaggttgacgtgcctataccactgcagaaagaaatgtctggttttttggctagc
aacagcgttgatagtcacaaagagattgaagcttctgatgagattatttccagtaaccta
aagaaaatccaagagcatcgtagaagacgtgctttctttcttagctttagtcagtctcca
tcagagtttatcaacactatgattgcttctcggagcaaggatccaaagcctgctgctgga
gatgccggctgcaattccaacaaggaacaacagcatcctgaattttataatcaaccatgg
gctgaagatgctgtcattcggtacttgaaccgcaaagctgctggaagagatgttcctgat
ggcaactaa
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