Lathyrus oleraceus (garden pea): 127084658
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Entry
127084658 CDS
T08598
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03013
Nucleocytoplasmic transport
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127084658
09122 Translation
03013 Nucleocytoplasmic transport
127084658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127084658
03041 Spliceosome [BR:
psat03041
]
127084658
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127084658
Spliceosome [BR:
psat03041
]
Complex C
Other components
EJC/TREX
127084658
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127084658
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
NBCH_WD40
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_EIPR1
TRM82_WD
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_IFT80_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
PAC11
Beta-prop_WDR41
WD_LRWD1
Beta-prop_Nup120_160
Beta-prop_ACSF4
Beta-prop_WDR35_2nd
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
127084658
NCBI-ProteinID:
XP_050881109
LinkDB
All DBs
Position
5:355927943..355932537
Genome browser
AA seq
314 aa
AA seq
DB search
MEEKYSFKNLHSREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHHGHGKVKDI
ELKGHTDSVDQLCWDPKHPDLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDG
THVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLSYPS
LRPLDTLMAHTAGCYCIAIDSTGRHFAVGSADSLVSLWVISEMLCVRTFTKLEWPVRTIS
FNHTGDLIASASEDLFIDISNVHTGKTVHHIPCRAAMNSVEWNPKYNVLAYAGDDKNKYQ
ADEGVFRIFGFENA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaatactcatttaagaatcttcatagccgagaatattccggtcacaagaag
aaggtgcactctgtggcttggaattgcattggcacaaaacttgcttctggttctgttgat
caaactgctcgaatctggcatattgaaccacatcatggccatggtaaagttaaagatatt
gaattgaagggtcacactgatagtgtggatcagctatgctgggaccccaaacatcccgat
cttattgcaactgcatcgggtgacaagactgttcgtctctgggatgctcgaagtggaaaa
tgctcacaacaagcagaacttagtggggagaacatcaacatcacctacaaacctgatggt
actcatgtagcagtaggtaatagggatgatgaattaacaatacttgatgttcggaaattc
aaaccaattcataggcgcaagttcaactatgaggtaaatgagattgcttggaatatgacc
ggcgagatgttttttttaacaacgggaaatgggactgtggaagtattgtcttatccatct
cttcggcctcttgataccctcatggctcatacagctggttgttattgcattgcaattgac
tcaactggaagacatttcgcagttggaagtgccgattcccttgtcagcttatgggttatc
tcagagatgctttgtgtgcgtacctttacaaagctcgaatggccggtccgtacaattagt
ttcaatcataccggggacttgattgcttcagcaagtgaagacttgttcattgatatttca
aatgttcatactggaaaaacagtacatcatattccatgtagagccgcgatgaacagtgtt
gagtggaatcctaaatacaatgtacttgcgtatgccggtgatgacaaaaacaagtatcag
gctgacgaaggtgtttttcgaatttttgggtttgaaaatgcttag
DBGET
integrated database retrieval system