KEGG   Lathyrus oleraceus (garden pea): 127084658
Entry
127084658         CDS       T08598                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
psat  Lathyrus oleraceus (garden pea)
Pathway
psat03013  Nucleocytoplasmic transport
psat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127084658
  09122 Translation
   03013 Nucleocytoplasmic transport
    127084658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psat03019]
    127084658
   03041 Spliceosome [BR:psat03041]
    127084658
Messenger RNA biogenesis [BR:psat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     127084658
Spliceosome [BR:psat03041]
 Complex C
  Other components
   EJC/TREX
    127084658
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    127084658
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_WDHD1_1st WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WDR55 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_Vps41 WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_WDR90_POC16_2nd WD40_RFWD3 NBCH_WD40 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_EIPR1 TRM82_WD Tricorn_2nd Beta-prop_DCAF12 Beta-prop_IFT80_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th PAC11 Beta-prop_WDR41 WD_LRWD1 Beta-prop_Nup120_160 Beta-prop_ACSF4 Beta-prop_WDR35_2nd Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 127084658
NCBI-ProteinID: XP_050881109
LinkDB
Position
5:355927943..355932537
AA seq 314 aa
MEEKYSFKNLHSREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHHGHGKVKDI
ELKGHTDSVDQLCWDPKHPDLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDG
THVAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLSYPS
LRPLDTLMAHTAGCYCIAIDSTGRHFAVGSADSLVSLWVISEMLCVRTFTKLEWPVRTIS
FNHTGDLIASASEDLFIDISNVHTGKTVHHIPCRAAMNSVEWNPKYNVLAYAGDDKNKYQ
ADEGVFRIFGFENA
NT seq 945 nt   +upstreamnt  +downstreamnt
atggaggaaaaatactcatttaagaatcttcatagccgagaatattccggtcacaagaag
aaggtgcactctgtggcttggaattgcattggcacaaaacttgcttctggttctgttgat
caaactgctcgaatctggcatattgaaccacatcatggccatggtaaagttaaagatatt
gaattgaagggtcacactgatagtgtggatcagctatgctgggaccccaaacatcccgat
cttattgcaactgcatcgggtgacaagactgttcgtctctgggatgctcgaagtggaaaa
tgctcacaacaagcagaacttagtggggagaacatcaacatcacctacaaacctgatggt
actcatgtagcagtaggtaatagggatgatgaattaacaatacttgatgttcggaaattc
aaaccaattcataggcgcaagttcaactatgaggtaaatgagattgcttggaatatgacc
ggcgagatgttttttttaacaacgggaaatgggactgtggaagtattgtcttatccatct
cttcggcctcttgataccctcatggctcatacagctggttgttattgcattgcaattgac
tcaactggaagacatttcgcagttggaagtgccgattcccttgtcagcttatgggttatc
tcagagatgctttgtgtgcgtacctttacaaagctcgaatggccggtccgtacaattagt
ttcaatcataccggggacttgattgcttcagcaagtgaagacttgttcattgatatttca
aatgttcatactggaaaaacagtacatcatattccatgtagagccgcgatgaacagtgtt
gagtggaatcctaaatacaatgtacttgcgtatgccggtgatgacaaaaacaagtatcag
gctgacgaaggtgtttttcgaatttttgggtttgaaaatgcttag

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