Pisum sativum (pea): 127084678
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Entry
127084678 CDS
T08598
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
psat
Pisum sativum (pea)
Pathway
psat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127084678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127084678
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127084678
mRNA degradation factors
5'-3' decay
Decapping complex
127084678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_C
FlgN
Motif
Other DBs
NCBI-GeneID:
127084678
NCBI-ProteinID:
XP_050881129
LinkDB
All DBs
Position
5:complement(357422602..357433052)
Genome browser
AA seq
1400 aa
AA seq
DB search
MSNPNQPQPPTPFDMHSFFNPPNPNLNPSPNPIISSQFPPSTPSPPPSSSSSYPPPAGPF
PPQPFPHHHNNHNNNYPYDHHNNFPIHHRSLSFPTPPLQPQPIPPPSNPNAGARLMALLS
APPQQQQHQQHQQHQQQQQPVSISVPFSSDYGAAANLPSPSQLVTPSASAASITAANAAA
AALIRLPSSKVPKGRHLIGDHVAYDVDVRLPGEVQPQLEVAPITKYGSDPNPILGRQIAV
NKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGCVFVWK
ISEGPDDEDKPQITANIVIAIQIVGEEKVEHPQICWHCHKQEILIVGMGKHVLRIDTTKI
GNGEAFVAEDPPKCPLDKLIDGVQLVGTHDGEVTDLSMCQWMTSRLVSASQDGTIKIWED
RKAQPLAILRPHDGHPVFSATFFTAPHQPNHIVLITAGPQNREVKLWVSSNEEGWLLPSN
TESWKCTQTLELKSSAGPSLKDAFFNQVAALPYAGLLLLANAQRNAIYAVHLGYGPNPES
THMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTLAIQQYALDLAQCLPPPLEHA
GLDRLDSNVSRDAVIAEGFASLDSSAGRTSEMPLPSSTPKITMQASSTESGLVARYPLSS
GHIEAPISREISSSNSEAKTVTLVPSSSDANIVCVPSPPLPLSPRLSRKLSDFRNPQSNL
SDHVGDQALNDYSVERQMDTIHRNLSDQLNSDSKNDENKIKQDDISSVLSPSVVFKQPTH
LVTPSEITKASSPSETNMIDRMSELETKIQDVGNAEVEVKVVGEARPNQNDEFGRQGPQQ
NPVSDGKEKFFCSQASDLGNEVAREFCAIGGETYITEEPGQVDSTGGDSLAQPSNAAEDG
LQDLPKDVHEKVSDSSTSAVVPPSPSSNTKGKRQKGKNPQPTGPSSPSPSVCNSTDSSNE
PNGISNLPSTENGLPQIMAMQDSLNQLLTMQKEMQKQMTMTVAVPVTKEGRRLEAALGRS
MEKAVKSNADALWARIQEENAKNEKLLRDRIQHVTGLITNFTNKDLPAILEKTIKKEMAS
VGQAVIRSMSPTIEKIISSTIVESFQRGVGDKAVNQLDKSVNSKLEATVARHIQAQFQTT
AKQALQDALKSSFETSVVPAFEISCKTMFEQVDATFQKGMAEHSNAVQQRLESGPTSLAM
TLRDSINSASSVTQTLSREVLEGQRKLMSLATSRTSSGTLSTLPIQLNNGPLLHEKVEAP
LDPTKELSRLISERKYEEAFIAALHRSDVSIVSWLCSQVDLHRLLSMVPLPLSQGVVLSL
LQQLACDINNDMSRKIAWMTDVATAINPSDPMITMHVRPIFEQVYQILNHQRSLPTITGA
DLSSTRLLLHVINSMLTTCK
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcccaatcaacctcaacctccaactcctttcgacatgcactctttcttcaat
cccccaaaccctaaccttaaccctagccctaatcctatcatttcttctcaattccctccc
tccaccccttcaccaccaccgtcttcttcctcctcttaccctccacccgccggtcctttc
cctcctcaacctttccctcaccaccacaacaaccacaacaacaactacccctacgatcac
cataacaatttcccaatccaccaccgttccctttctttccctactccccctcttcaacct
caaccaatccctccaccttccaatcccaacgccggtgcccgtctaatggctctcctcagc
gcccctcctcaacagcaacaacatcaacaacatcaacaacatcaacaacaacaacaaccc
gtttccatctctgttccattctcttccgattacggtgctgctgctaatttgccttcgcca
tcgcaactggttactccctctgcctctgccgcctccattacagccgccaatgcagccgct
gccgctctgattcggcttcctagcagtaaggttcctaagggaaggcacttgattggggac
catgttgcgtatgacgtggatgttaggttgcccggtgaagtacagcctcagcttgaagtt
gctcccattacaaaatatgggtccgatcctaatccgattctcggtaggcagattgctgtg
aataagtcttatatatgttatgggttgaaacaggggaatattagggtgcttaacattcac
actgcagttagatctttgcttagaggccacactcagagggtcacagacttggcgttcttt
gctgaagatgttcatttgctggctagtgttggcacagatggatgtgtctttgtatggaaa
atttctgaaggtccagatgatgaagataagcctcaaattactgccaatattgttattgct
attcaaatagtaggagaggagaaagttgaacatcctcaaatttgctggcactgccacaaa
caagagattttgatagttggtatgggaaaacatgttctgagaattgacaccaccaaaatt
ggaaatggtgaagcctttgtggcagaagatcctccgaaatgtccccttgacaagctcatt
gatggggttcagcttgtaggaacacatgatggggaggtcactgatttgtcaatgtgccaa
tggatgacaagtcgactggtatctgcatcacaggacggcacgataaagatatgggaagat
cggaaggcacaacctcttgctattttgagacctcatgacgggcatcctgttttttccgct
acgttttttactgctcctcaccagcctaatcatattgtccttatcacagcgggaccgcaa
aatcgggaagtgaaactctgggtatcatcaaatgaagaaggttggctgctcccaagcaat
actgaatcttggaaatgtactcagactttggagttgaagagttcagctgggccgtctctt
aaggatgcattctttaatcaagttgcagcattgccttatgcaggtctgcttttacttgct
aatgcacagaggaatgctatatatgctgtgcacttaggatatggtcctaatcccgaatca
actcacatggattatatagccgagtttaccgtcaccatgcctattctgagttttactgga
acaagtgatattttgcctcatggcgaacatattgttcaggtttattgtgttcagacattg
gctattcagcagtatgccttggatttagcacaatgcttgcctccgccattggaacatgca
ggactagataggttagattccaatgtttcacgagatgcagttattgctgaagggttcgcc
tctttagactcgtctgcaggtagaacatctgagatgcctttacctagttctactcccaaa
ataactatgcaagcaagtagcactgagagtggtcttgtggcaagataccctttaagttcg
ggtcatattgaggcacctatttctagagaaatcagcagttcaaacagtgaagctaaaact
gttacattggttccttctagtagtgatgctaatattgtttgtgttccttctccacctctt
cctttgagcccaaggttgtccaggaagctttctgatttcaggaatccacaatctaacttg
agcgatcatgttggggaccaagctcttaatgattattcagttgaaagacaaatggatacc
attcaccggaacttgtccgaccaattgaatagtgattcaaagaatgatgaaaataaaatc
aaacaagatgacatttctagtgtacttagcccttctgtcgtgtttaagcaaccaactcat
ctggttacaccatctgagataacaaaagccagttccccgtctgagactaatatgatcgat
agaatgagtgaactagaaactaagatccaggatgtgggtaatgcagaagtagaggtgaaa
gtggtaggtgaggcaaggcctaatcaaaatgatgaatttggaaggcaggggccacaacaa
aacccagtttctgatggcaaagaaaaattcttttgctctcaggcttctgatcttggcaat
gaggtggcccgagaattttgtgcgataggtggggaaacttacattacagaggaacccgga
caggttgattctactggaggggattcactggcacaaccctctaatgcagccgaggatgga
cttcaagacttgccaaaagatgtccatgaaaaggtttccgactcatctacatcagcggta
gtaccaccgtcaccttcttctaatacaaaaggaaagagacaaaaaggtaaaaatcctcaa
ccaacaggtccgtcttccccatctccaagtgtatgcaattcaactgattcgtccaatgag
ccaaatggaatttcaaatctcccatctactgaaaatggtttgcctcaaattatggcaatg
caagattcactcaatcagttattgacaatgcaaaaggagatgcagaaacaaatgacaatg
acggttgcagttccagttaccaaagagggtagaaggcttgaagccgccctagggagaagc
atggaaaaagctgtcaagtccaatgctgatgctttgtgggctagaattcaagaggagaat
gcaaaaaatgaaaagttgttacgagaccgtattcaacatgttacaggtttgattactaac
ttcacgaacaaggatctaccagcaatattggagaaaactataaagaaggaaatggcttca
gttgggcaagctgtaattcgttcaatgtctcctactattgagaaaataatatcctctact
atagtggaatccttccagagaggagtgggcgacaaggcagtgaatcaacttgataaatca
gttaattcaaaactcgaagctaccgtagctaggcatatccaagcacagtttcagacaact
gccaaacaggcgcttcaggatgcactcaaatccagttttgaaacatcagtggttcctgca
tttgagatctcctgcaaaaccatgtttgagcaagtggatgctacattccagaaaggcatg
gctgaacattcaaatgcagtgcaacaacgccttgaatctgggcctacttcattggcaatg
actctaagggattccattaattcagcttcatcagttactcaaaccttgagtagagaagtg
ctcgagggccagagaaagctaatgtcacttgcaacctcaagaacaagctcaggcacattg
agtactctgcccatccagctgaacaatggtccattacttcatgaaaaggttgaggcgcct
ctagatcccacaaaggagctatcaagattgatttctgaacggaaatatgaggaggcattt
attgcagcattgcatagaagtgatgtatctattgtatcatggttatgctctcaggttgat
ttacatagacttttgtcaatggttcctcttcccttaagccaaggtgtagtgctttctctt
ttgcagcagttggcgtgtgatattaacaacgacatgtcccgaaagatcgcatggatgaca
gatgtggctactgccattaatccctcagatccgatgataacaatgcatgtccggcccata
ttcgaacaagtctatcaaatactgaatcatcaacgtagcttgcctacaatcaccggtgct
gatctttcaagtacccgccttttattgcatgtcatcaactccatgcttacgacatgtaaa
tga
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integrated database retrieval system
