Pisum sativum (pea): 127084840
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Entry
127084840 CDS
T08598
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
psat
Pisum sativum (pea)
Pathway
psat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127084840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psat03021
]
127084840
03036 Chromosome and associated proteins [BR:
psat03036
]
127084840
Transcription machinery [BR:
psat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127084840
Coactivators
SAGA/TFTC/STAGA complex
127084840
Chromosome and associated proteins [BR:
psat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127084840
STAGA complex
127084840
TFTC complex
127084840
SAGA complex
127084840
SLIK complex
127084840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CBFD_NFYB_HMF
CCDC47
Motif
Other DBs
NCBI-GeneID:
127084840
NCBI-ProteinID:
XP_050881319
LinkDB
All DBs
Position
5:complement(372013476..372018106)
Genome browser
AA seq
500 aa
AA seq
DB search
MSAIPKETIEVIAQTIGITNLSSDVSLAVAPDLEYRIREIIQESIKCMRHSMRTFLIAED
VDSALALRNLEPIYGFASNDNLRFKRAPGYNGLFYIDDRDVDIKDLIEEPLPKAPLDTSI
TSHWLAIEGVQPAIPENAPTEATPEIRKTEYKEDGLPVDVKLPVKHIITTELQLYYEKII
ELILNKPGSVPFRRALVTLATDSGLHPLVPYFTRFVADEVARNLHNLNNLFASMRLVRSL
LQNPHIHIELYLHQLMPPIITCIVAKRLGNRLSDNHWELRDFSANLVALICKRFGHMYHN
LQPRVTRTFLHTFLDPTKALPQHYGAIKGIAALGSRLVRLLIIPNLEPYLHLLVPEMQLE
KQKNEIKRQEAWQVYGALLCAVGQNMHEKVKGISSLLSPPTRAALSGNGKAMIAVPGVTG
VVVPMNSMSVDNTQGSTSGFPPMMGAPSSIGRQLSKENSSVLAQAWKDDIDAGQLLPPVF
ELFGESLLSFIPKPEASIFL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgattccaaaggaaacaattgaagtaattgcacaaacaattggcatcaccaat
ttatcttccgatgtttccctcgccgttgcccccgatcttgaatatcgcattcgcgaaatc
attcaggagtctattaaatgtatgcgccattccatgagaacttttctcattgctgaggat
gttgatagtgcactcgcattgagaaatttagagccgatatatggtttcgcttctaatgat
aatctgcggttcaaaagagctcccgggtataatggtttgttctacattgatgacagggat
gtggatattaaagatctgattgaagaacctttaccaaaagcacctcttgatacatcgatt
actagtcattggttggctattgaaggcgtgcaacctgcaatacctgaaaacgctccaact
gaagctacccctgagataagaaaaactgaatataaagaagatgggcttcctgttgacgtt
aaattacctgttaaacatataataacgacagagcttcagctttactacgaaaaaataata
gagctgattttgaataagcctgggtccgttcctttcagaagagcactggtcaccttggca
actgactcagggctccatcctttagttccttattttacacgctttgttgctgatgaggtg
gcacgaaatctacataatttaaataatttatttgcctcgatgcgccttgtgcggagcctt
ttgcaaaatcctcacatacacatagaactttatttgcaccaattgatgccgcctatcatt
acctgcattgttgcaaaaaggcttggaaacagactgtccgataatcattgggagcttagg
gatttcagcgctaatcttgttgctttgatatgtaaaagatttgggcatatgtatcacaat
cttcagccccgtgtaacaaggacatttcttcatactttcttggaccctacaaaagctctg
cctcaacactatggtgcaattaaaggaatagcagctcttggatcaagactggttcgcttg
cttataattccaaatctcgagccatatttgcatcttcttgtgccagaaatgcaacttgag
aagcaaaagaatgaaataaaaaggcaagaagcatggcaagtctatggagccttgctgtgt
gctgtaggccaaaatatgcatgaaaaggtcaaaggaatcagcagtttgctctcccctcca
actcgcgcagcattaagtggcaatggaaaagccatgattgcagtgccaggtgttactggg
gttgtggtaccaatgaattccatgtcagttgacaacacgcaggggtcgacaagtgggttt
ccacccatgatgggcgcaccatcatcaataggtcgtcaattgtccaaagaaaactcttcc
gttctagctcaggcttggaaagatgacatagatgcaggacaattgctgccaccagtgttt
gaattatttggcgaaagtttgttatcatttataccaaaacctgaagcatctatatttttg
tag
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integrated database retrieval system
