Lathyrus oleraceus (garden pea): 127084974
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Entry
127084974 CDS
T08598
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
psat
Lathyrus oleraceus (garden pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psat03041
]
127084974
03009 Ribosome biogenesis [BR:
psat03009
]
127084974
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127084974
Spliceosome [BR:
psat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127084974
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
Pre-60S particles
Helicases
127084974
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
127084974
NCBI-ProteinID:
XP_050881473
LinkDB
All DBs
Position
5:complement(385995231..386003744)
Genome browser
AA seq
762 aa
AA seq
DB search
MSPSFIFDPPSDEDIELSEHESDSETEQEQPESPSSSQSQSQSESELESEEDEVVEPRVS
KKKTQSPWDFTKYSESVAEEHARRSTTSVNDKISAVRQRSAPVVALPDSDEDSASDSEPD
KQEDYRPEEEDEEEGNAGDTKSFFAPSDGASFSADSFLQLNLSRPLLRACEALGYAKPTP
IQAACVPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKRVYAIRVLILTPTRELAA
QVHSMIEKLAQFTDIRSCLIVGGLSTKVQEAALRSMPDIVVATPGRMIDHLRNSMSVDLD
DLAVLILDEADRLLELGFSAEIQELVRVCPRKRQTMLFSATMTEEVDDLIKLSLSKPLRL
SADPSAKRPASLTEEVVRIRRMREVNQEAVLLAMCTKTFTSKVIIFSGTKQAAHRLRIIF
GLSGLKAAELHGNLTQAQRLEALEQFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRD
LTSYVHRVGRTARAGRAGSAVTFVTDNDRSLLKSIAKRAGSKLKSRIVAEQSILKWSQVI
EQMEDQISEVLQEEREEMILRKAEMEATKAENMIAHRDEIFSRPKRTWFVTEKEKKLSAK
AAKASIDKENGSSQKMVSAQEAEDLKLKEKRKREREKNMPRKKRRKLEAAREMLEDEDEE
DKPKGKGADKNEKSGMTLADLAYRRAKAVKAVKRALDSGKIVRKPQKKSNKSTSRKTSSS
RTEEMRELFQTDMKDKKPKQRGSGLGKKPNKSFKSKSRYKRK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccagtttcatcttcgaccctcccagcgacgaagatatcgaactctccgaacac
gaatctgattcggaaacagaacaagaacaacctgaatctccatcttcatcacaatcacaa
tcacaatcagaatcagagctagaatcagaagaagatgaggtcgtagaaccgcgagtttca
aaaaagaaaacacagtctccatgggatttcactaaatactctgaatcagtagctgaagaa
catgctcgtagaagcacaacatcagtaaacgacaaaatctcagccgtcagacaacgttca
gcgcccgtcgttgcgttgcccgactcggatgaagatagtgcctctgactctgagcctgat
aaacaagaagattatagaccagaagaagaagatgaagaagagggtaatgctggtgacact
aagtccttttttgctccttctgatggagcctctttcagtgctgattccttcttgcaactc
aatttgtctcgccctttgctcagggcttgtgaggccttggggtatgctaaaccaacacca
attcaggcggcttgtgtaccattagcattgactggtcgtgatatatgtggaagtgccatt
actggatcgggaaagacagctgcatttgcactacctactttagagaggttgctgtttcgt
ccaaaacgcgtgtatgcaattagggtccttattcttactccaaccagagagttggctgcc
caagttcacagtatgatagagaagcttgctcaatttactgacataaggagttgtctgata
gtcggtggtctgtcaacaaaggtgcaagaggctgccttgagatctatgccagacattgtt
gtggctactccaggacgcatgatagaccatttacgcaattctatgtcggtggatttggat
gatcttgctgttttaatcctcgatgaagctgatcgtcttttggagcttggatttagtgct
gaaattcaggaacttgttcgtgtgtgtccccgaaaaaggcagaccatgcttttttcagca
accatgaccgaggaggttgatgatcttattaaactttccctatcaaaaccactgcgtctt
tctgctgatccatctgcaaaacgaccagcatccttgactgaggaggtggttagaataaga
agaatgcgcgaagtcaaccaggaagcagttcttctagcaatgtgcaccaaaacttttact
tctaaagtgatcattttcagtggaactaagcaagcagcacataggctaaggattatattt
ggattatctggattgaaagctgctgagcttcatggaaatcttactcaggcccaacgtctt
gaagctttggaacagttcaggaagcagcaagtggattttttggttgcaactgatgtggct
gctcgtggacttgatattattggtgttcaaacagttatcaattttgcatgtcctcgcgat
cttaccagctatgttcatcgagttggtcgtactgcaagagctggaagagctggatctgcc
gtcacatttgttactgataatgatcggtcacttctaaaatctattgcaaagagggctggt
tcaaagctgaaaagccgcattgtggcagagcaatctatactcaagtggtctcaagtaatt
gagcaaatggaggatcaaatttctgaagtacttcaagaagagagggaagaaatgatccta
aggaaagctgaaatggaggccacaaaggctgaaaacatgattgcacacagggatgagatc
ttctcccgccccaaaagaacctggtttgttacagagaaggagaagaagctttcagctaaa
gcagcaaaggcatccatagataaggaaaatggttcttctcagaagatggttagtgcccag
gaggctgaagacctaaaactgaaggaaaagaggaaacgggagcgagagaaaaatatgcct
agaaagaaacgcagaaaattggaagcagctcgagagatgttggaggatgaggatgaggaa
gacaaaccaaaaggtaagggggcagataagaatgaaaagagtggaatgacgcttgctgat
cttgcataccgacgtgcaaaagcagtaaaggctgtcaagagggcactagattccggaaag
attgtgaggaagcctcagaagaaatctaataaatccacttctcgaaagacttcctcttca
aggacagaagaaatgcgggagttattccagactgacatgaaggataaaaagccaaaacag
agaggttctggactaggaaagaagcccaataaatcattcaaaagcaagtcaaggtacaag
aggaagtag
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