Lathyrus oleraceus (garden pea): 127085791
Help
Entry
127085791 CDS
T08598
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-I
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127085791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psat03021
]
127085791
03019 Messenger RNA biogenesis [BR:
psat03019
]
127085791
Transcription machinery [BR:
psat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127085791
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127085791
U7-dependent histone pre-mRNA processing factors
127085791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
127085791
NCBI-ProteinID:
XP_050882297
LinkDB
All DBs
Position
1:461714501..461718024
Genome browser
AA seq
702 aa
AA seq
DB search
MSSVKKREPNVASNNREAEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPAYSGM
AALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDY
VKVSKVSIEDMLFDEQDINRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIA
GVRVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTI
SQGGRVLIPAFALGRAQELLLILDEYWQNHPELQNIPIYYASPLAKKCLTVYETYTLSMN
DRIQNAKSNPFSFKHISALSSIDVFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNCC
VLPGYVVEGTLAKTIINEPKEVTLMNGLSAPLNMQVHYISFSAHADSAQTSAFLEELNPP
NIILVHGEANEMGRLKQKLVTQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTP
QVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYPGAFSVIQHRLRQIYE
SVEPSVDEESGVPTLLVHERVTVKHESEKHVSLHWTADPISDMVSDSVVALVLNINRDLP
KIIAESDATKIEEANEKKIEKVMHALLKSLFGDVKVGENGKLIINIDGNVAELDKESGEV
ESQNEALKERVRTTFKRIQSSVKPIPLSQIQNSVKPIPLSPP
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagtaaagaaacgcgaaccgaatgttgcaagcaacaacagagaagccgaagat
caattgatagtaacaccattaggagccggcaatgaagttggtcgttcttgtgtctacatg
acctacaaaggaaaaacagttttattcgattgcggtattcatcctgcttactccggcatg
gcggcgctgccgtacttcgacgaaatcgatccttcaactgtcgacgtacttctcatcact
cattttcacttggatcacgccgcttcgcttccttattttctcgagaaaacaactttcaaa
ggtcgggttttcatgacgtacgcaacgaaggcgatttacaagcttttgttgtctgattat
gtgaaagtcagtaaggtttctattgaagatatgctttttgatgagcaggatattaatcgc
tccatggataaaattgaggttattgatttccatcaaacgcttgaagtgaacggtattaga
ttctggtgttacactgcaggccatgtccttggtgctgctatgtttatggttgacattgca
ggtgttagagtgttgtatacaggagactattcacgtgaggaagacaggcatcttcgagct
gcagagaccccacagttttcacctgatgtctgtattatagaatctacctatggtgtacaa
caccatcagcctcggcacacacgagaaaagaggttcactgatgttattcattcgaccatt
tctcaagggggtcgtgtgttgattccagcttttgctcttggtcgggcacaagagctactg
ctgatccttgatgagtattggcaaaatcatccggaactccagaatatacctatctattat
gcttctcctcttgccaaaaaatgtttgactgtttatgagacttacaccctttcaatgaat
gataggattcagaatgcaaagtcaaatccgttttcctttaagcacatatcggcattgagc
agcattgatgttttcaaagacgtaggaccgtctgtggtgatggcgagccccggtggactt
cagagtgggttgtcacggcaattatttgatatgtggtgctctgacaagaaaaattgttgt
gttttacctgggtatgttgtggaggggacactagcaaaaactatcattaatgaacctaag
gaagttactctgatgaatggactctctgcacctctcaacatgcaggttcactacatttcc
ttttctgcccatgctgactctgctcaaacaagtgctttcttggaagagctcaacccgcct
aacataattcttgttcatggggaagctaatgagatggggaggctcaaacagaaacttgtg
actcagtttgctgatcgtaacactaagatcctcactcccaaaaactgtcagtctgttgaa
atgtatttcaattcacagaaaatggcaaaaaccattgggaagctggctgaaaaaacacca
caggtcggtgaaaccgtcagtggtttgctagttaaaaaaggcttcacatatcaaataatg
gcacccgatgatctccatgtcttctcgcagctatcaacggcaaacgttactcagagaatt
accatcccttatccaggtgcctttagtgtcatacaacatagactgagacaaatatatgag
agtgttgagccgtcagtggatgaagaatctggagttccaaccttgctagttcatgagcgt
gtgacagtgaagcatgagtcggagaagcatgtctccttgcattggacagcagaccccatt
agtgatatggtatcagattcggttgttgctctagttttaaatattaaccgtgatcttcca
aaaataatagctgaatcagatgctacaaaaattgaggaagcaaatgagaagaagatagag
aaggttatgcatgctctcctcaagtcactctttggagatgtgaaggttggagaaaatggg
aagctgataattaacattgatggcaacgtggctgagctcgacaaggaaagtggtgaagtt
gagagtcaaaatgaagcccttaaagaaagagtaagaacaactttcaagcgaattcaaagt
tctgtgaagccgatacctctttcacaaattcaaaattctgtgaagccgattcctctttca
ccgccatag
DBGET
integrated database retrieval system
