KEGG   Pisum sativum (pea): 127086057
Entry
127086057         CDS       T08598                                 
Name
(RefSeq) replication factor C subunit 2-like isoform X1
  KO
K10755  replication factor C subunit 2/4
Organism
psat  Pisum sativum (pea)
Pathway
psat03030  DNA replication
psat03410  Base excision repair
psat03420  Nucleotide excision repair
psat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127086057
   03410 Base excision repair
    127086057
   03420 Nucleotide excision repair
    127086057
   03430 Mismatch repair
    127086057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psat03032]
    127086057
   03036 Chromosome and associated proteins [BR:psat03036]
    127086057
   03400 DNA repair and recombination proteins [BR:psat03400]
    127086057
DNA replication proteins [BR:psat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    127086057
  DNA Replication Termination Factors
   ELG1-RFC complex
    127086057
Chromosome and associated proteins [BR:psat03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    127086057
DNA repair and recombination proteins [BR:psat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     127086057
  Check point factors
   HRAD17(Rad24)-RFC complex
    127086057
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 AAA_14 AAA_22 AAA_16 Mg_chelatase Rad17 Viral_helicase1 nSTAND3 RuvB_N AAA_11 AAA_5 AAA_24 AAA_19 DEAD AAA_28 AAA_30 MeaB AAA_25 RNA_helicase AAA_18 AAA_3 ABC_tran bpMoxR NTPase_1 KTI12 IstB_IS21 SLFN-g3_helicase AAA_7 NPHP3_N DO-GTPase1 AAA_29 cobW
Other DBs
NCBI-GeneID: 127086057
NCBI-ProteinID: XP_050882692
LinkDB
Position
5:complement(526005056..526008866)
AA seq 195 aa
MASSSSSNSANYDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
TTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRL
MVVVQAEKVHDGSVV
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcatcgtcatcctcaagcaacagcgcaaactacgacgtaccgtgggttgagaagtac
cgacccagcaaggtcgtcgacatcgtcggcaatgaagacgccgtctcccggctccaagtc
atcgctcgtgacggcaacatgcccaacctcattttatcaggtcctcctggaactggaaaa
accactagcatcctcgcacttgcgcacgagcttctcggtcccaattacagagaagctgtt
cttgaactaaatgcttcagatgatagaggaatagatgttgtgaggaacaagatcaagatg
tttgctcaaaagaaagtaacacttcctccaggccgacacaaagttgttatactcgatgaa
gctgacagtatgacatctggagcacagcaagctttaagaaggacgatggagatatattct
aattctactcgtttcgcgcttgcttgcaatacatcgtctaagattattgagccgattcag
agtaggtgtgcaattgtgagattttcgcgactatctgatcaagagatacttggtcgtctc
atggttgtggttcaagctgagaaggttcatgatggttctgttgtatga

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