Lathyrus oleraceus (garden pea): 127086093
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Entry
127086093 CDS
T08598
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127086093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psat04121
]
127086093
Enzymes [BR:
psat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127086093
Ubiquitin system [BR:
psat04121
]
Ubiquitin ligases (E3)
HECT type E3
127086093
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
ARM_ARMC5
HEAT_EZ
HEAT_2
HEAT
TFIIA
Motif
Other DBs
NCBI-GeneID:
127086093
NCBI-ProteinID:
XP_050882739
LinkDB
All DBs
Position
5:complement(3249600..3275611)
Genome browser
AA seq
1882 aa
AA seq
DB search
METRSRKRAEGSSAAPSSSSSTTTARITRSASTKRTRLSSISNATSLSVNTRSRSSINNS
ASGSSMEPLPVNESSSGSRRDRRGRNNSDRDNSDKGKEKEHDVRVRDRDRRLVGLNIVSG
GGADDDDDESDGDGDGEDGIMHENLNSASSALQGLLRKLGIGFDDLIPMSGSGSSSYQDG
RFKKILSALRADGEEGPQVEALTQLCEMLSIASEDSLSSFSVDSFVPVLVGLLNHESNPD
VMLLAARALTHLCDVLPSSCTAVLHYGAVPIFCARLLTIEYMDLAEQSLQALKKISQEHP
TACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYH
DAKVLEHASICLTRIAEAFASSPDKLDELCNHGLVAQAASLISTSSSGGGQASLGMSTYT
GLIRLLSTCASGSSLGAKTLFLLGISGILKDILSGSGVSSDASVSPALNRPADQIFEIVN
LANELLPPLPQGTMSLPVISNVVLKGPDVKRSPASSSGTQEDPTEIVHEISAREKILNDQ
PELLQQFEMDLLPVLMQIYGSSVNGSVRNKCLSVIVKLMYFSTAEMIQSLLSVTNISSFL
AGVLAWKDPHILVHALQIAEILMEKLPDTFSKMFVREGVVHAVDQLIVAGESISITTTQT
SSREKDNDSISGASFHRKHYHLRSGNLNPDESLLDDLKSPVPVNASGPPCSVETPTVNSS
IRSSVSSAAKTFKDRYFPSVPGTVEVGVSDDLLHLKNLCIKLNTGVDDQRTKAKGKVKAS
GFGQDKKSANLEDYLIGVISDMLKELGKGDGVSTFEFIGSGVVEALLNYFSCGYYSKHRI
SKTNILKLRQLALMRFKSFVAVALPTNTDNRVAAPMTILVQKLQNALSSLEHFSVLSSGQ
SASSQPYKLRLCRAQGEKSLKDYSSTIVLIDPLASLAAIEEFLWPRVQRGESAQKSTVPV
GNLASGTTPTGAGASSPSARTPSIAHRHSTRSRTSVSIGDTSRKELSRNKSMSSSKVKGK
AVFKPAQEEARGPQTRNAARRRADLNKDAFMKPTNGDSTSEDEELDISPVEIEDDDISDD
DISEDDEDDHEDVLRDDSLPVCSPDKVHDVKLGDPAEESTLAAVTNDSLTNVALGSSSKA
GTARESDSADFKSGHSSSSRGATSFAAAAMSGLGYANTRGFRGGRDRHGRLLFGSSNEPP
KLIFTAGGKQLNRNLTVYQAVQRQLVIDEDDDDRFARSDLVSSDGSGPWGETCTITYQRA
ENQTNRDPTGVSSSNTLKAAKSGSSSNFSSEGKLHQTSVLDSILQGELPCDLEKSNPTYN
ILALLRVLEGLNQLAPRLRAQMVNDRFAEGKIFDFDELGVTAGARVSPEEFVSSKITPKL
ARQIQDALVLCSGSLPSWCNQLTKACPFLFPFETRRQYFYSTSLGLSRALNRLQQQQGAE
GLGSTTERAMRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPT
LEFYTILSHELQKVRLQMWRSYSSEKHQMEVDGDKKKMKSCEGYGLNVPGDGELVQAPTG
LFPRPWPTNADASEDSQFTKVVEYFRMLGRVMAKALQDGRLLDLPLSVAFYKLILGQDLD
LHDIVFIDAELGKTLQELNAIVRRKQHIKVICVNSTDANTDFVFRGTQIEDLCLDFTLPG
YPEYILKPGDDIVDINNLEEYVSLVVDATVNNGITRQMDAFRAGFNQVFDISSLQIFNPQ
ELDNLLCGRRELWEAETLTDHIKFDHGYTAKSPAIVNLLTIMGEFTPEQQRAFCQFVTGA
PRLPPGGLAVLNPKLTIVRKLSSTAVNTSYNGIVHSESADDDLPSVMTCANYLKLPPYST
KEIMYKKLLYAISEGQGSFDLS
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcgtagccggaagagggcggagggttcctcagctgccccttcatcatcatca
tcgacaaccactgctcgcatcactcgttcagcttcaaccaaacgcactcgtctctcttcg
atctccaacgctacttctctttccgttaacactcgctctcgttcatccatcaataattct
gcttctggttcttcaatggaacctcttcctgttaacgaatcctcctccggttcgcgccgt
gatcgccgcggtaggaataattccgatagggataattctgataaaggtaaagagaaagaa
catgatgttagggttagggatcgggaccggagattggtcggtttaaacattgttagcgga
ggtggtgctgatgatgacgatgatgagagtgatggtgatggtgatggtgaggatggaatc
atgcatgagaatttgaactctgctagtagcgcacttcaggggcttcttaggaaactcggt
attggatttgatgatctgattccgatgagtggttctggatcttcgtcgtatcaggatgga
aggttcaagaagattttgtctgctttgcgtgctgatggggaagaaggtcctcaagttgag
gcattgacgcagctatgtgaaatgctttctattgcttctgaagattcactcagttcattc
tctgttgattcctttgttcctgtgctcgttgggttgcttaaccacgagagcaatcctgat
gtcatgcttctagctgccagggcgttaactcatctctgcgatgtgcttccgtcatcttgt
actgctgttctgcattatggtgcagtgccaatcttctgtgccagattgcttaccatagag
tatatggacttggccgagcagtctcttcaagcgttaaagaagatttctcaggagcacccg
actgcatgtcttcgagctggtgctctgatggccgttctttcttatttggacttcttctct
actggagttcagagggtggcattgtcgactgctgctaatatgtgcaagaagcttccttct
gatgcagctgactttgtgatggaagctgttcctcttttgacaaaccttcttcagtatcat
gatgccaaggttcttgagcatgcctccatatgtctgactcgaatagctgaggcatttgca
tcatccccagacaaattagatgaattgtgcaatcatggactggtggcacaagctgcctcc
ctaatttctactagtagttctggaggtggacaggcttctctcggcatgtcaacatatact
ggcttgatccgacttctttccacatgtgcaagtgggtcctctcttggagctaaaacattg
tttctccttggaattagtggcattcttaaagatatactatctggttctggagtttcctcc
gacgcctctgtttcacctgcattaaataggccagcagatcagatatttgagattgtgaac
ctggcaaatgaacttttgcctccgttgcctcaaggaaccatgtctcttccagtcatatca
aacgtggttttgaaagggcctgatgtgaaaaggtctcctgctagcagttctgggacacaa
gaagacccaactgaaattgttcatgagatatcagctcgagagaaaatactaaatgaccag
cctgagctacttcagcaatttgagatggatctcctcccagttttgatgcagatatatggt
tccagcgtcaatggttctgttcgcaacaaatgtctctctgtcattgtaaaattaatgtat
ttcagcacagctgagatgatccagtctttgttaagtgtgactaatatatcaagtttctta
gctggtgttctagcatggaaagatccacatattttggttcatgccttgcaaattgcagaa
attcttatggaaaagcttcctgatacattctctaagatgtttgtcagagaaggtgtggtc
catgcagttgaccaacttattgttgctggagagtcgatcagtatcactactacacaaacc
tcttccagggagaaggataatgattccatatctggagcatcatttcaccgtaagcactat
cacctacgcagtggtaacttaaatcccgacgaaagtctcctggacgatttgaagagtcca
gttccagtaaatgcgagcgggccaccatgttctgtggaaactccaacagttaactcaagc
attcgctcatctgttagctcagctgctaaaacttttaaagacaggtactttccttctgtt
ccggggactgttgaagtgggtgttagtgatgatcttttgcacctgaaaaatctttgcatc
aagttgaatactggcgttgatgaccaaagaactaaggcaaaggggaaagttaaagcttct
ggatttggtcaggacaaaaagtctgctaatttagaagattatttgattggggtgatttct
gacatgctaaaagagcttggcaaaggagatggtgtgtctacttttgaatttattggaagt
ggtgttgttgaagctttgcttaattacttttcttgtgggtattattcaaaacatcgaatc
tcaaaaaccaatattctcaagcttcggcaactagcacttatgaggtttaagtcatttgtt
gctgttgcactacctactaacactgataatagggttgctgctcctatgactatcttggtt
cagaagcttcaaaatgctttgtcttccttggagcatttttctgttctttcttctggacaa
agtgcttcatctcagccctacaagttgcgtctctgtcgagcccagggtgaaaagtcactt
aaagattattcatcaaccattgtattgattgatcccttagcgagtttagcagcaatcgag
gagtttctgtggccccgtgtccagcgtggtgaatctgctcaaaagtctactgtacctgtt
gggaatttggcatctggaacaactcctacaggagcaggtgcttcatctccttccgctcgt
actccctccattgcccatcgtcattctactagatctagaacttctgttagtataggagat
acttctagaaaagaactatctcgaaataaaagcatgagctcatctaaggtcaagggcaaa
gctgtatttaagcctgcacaggaggaagcaagaggaccccaaacaaggaatgctgcacgg
agaagagcagatctcaacaaagacgctttcatgaaaccaacaaatggtgactcaacgtct
gaggatgaagaattggatatatctcctgttgagattgaagatgatgatatttcagatgat
gatatttcagaggatgatgaggatgaccatgaagatgttctgagggatgattctcttcct
gtttgctctcctgacaaagtacatgatgtgaaattaggagacccagcggaggagagtacc
ttggccgctgtaacaaatgatagcctgactaatgtagctttaggttctagcagcaaagct
ggtacagccagggagtctgactctgctgattttaagagtggccattcatctagctcaagg
ggtgcaacgtcgtttgccgctgctgccatgtcaggacttggatatgctaatacaagaggt
ttcaggggtggcagagatagacatggacggctgttgtttggaagttccaatgagcctccg
aaattgatttttactgctggtgggaaacagctcaatagaaatctgactgtatatcaggca
gttcaaagacagcttgtgatagatgaagacgacgatgataggtttgctagaagtgatttg
gtttccagtgatggaagtggaccgtggggtgaaacttgcaccatcacttatcagagggct
gaaaatcagactaacagagatcctactggagtatcaagttcaaatactttgaaggctgcc
aaatctgggtcttcctctaatttcagttcagaaggtaagttgcatcagacgtcagttcta
gacagtatattgcagggagaattgccttgtgatctagagaaatctaatccaacctacaac
attctggcactactgcgcgtgttggaaggtttgaaccagcttgcgcctcgtctaagggcc
caaatggttaatgaccgatttgctgagggaaaaatctttgattttgacgagctaggtgtt
accgctggtgctagggtgtctccagaggaatttgtaagtagcaagattactccaaaattg
gctcggcaaatacaggatgcacttgtactgtgcagtggcagtcttccctcgtggtgtaac
cagttgactaaagcatgccctttcttgtttccttttgagactcgacgacagtacttttat
tcaacttccctcgggttatctcgtgcactcaatcgacttcagcagcaacaaggtgctgag
ggtctaggatcaacaactgaaagagcgatgagggtagggagattgcaacgccaaaaggtc
cgtgtatctcgaaatcggattttggactctgctgcaaaagttatggagatgtattctagc
caaaaagctgtgcttgaagtggaatattttggtgaagttggcactggcctgggccccacc
cttgagttttataccattctaagtcacgaattacaaaaagttagactgcaaatgtggagg
tcttattcttcagagaaacatcaaatggaggttgatggagataaaaagaaaatgaaaagc
tgcgaaggctatggtcttaatgtccctggagatggtgaactagtgcaagctcctacaggg
ttgtttcctcggccatggcctacaaatgctgatgcatcagaggatagccagtttacaaaa
gtggttgaatattttcggatgctaggtcgtgtgatggctaaagctcttcaagatggacgc
ctattggatcttccattgtcagtggcattttataagcttattcttggtcaagatcttgat
ttgcatgacattgttttcattgatgcggagcttgggaagactttgcaagagttgaatgcc
attgttcggcgcaagcaacatataaaagttatttgtgttaactctactgatgctaacact
gactttgtatttcgtggcacccaaattgaagatctctgtttggactttacacttcctggt
tatccagaatacatattgaaaccaggagatgacatagttgatatcaacaatttggaggag
tacgtatccctggtggttgacgcaactgtcaataatggaatcacacgacaaatggatgca
ttcagagcagggtttaaccaggtttttgacatttcgtctttacaaatttttaatccccaa
gaactggataatttgctttgcggtcgccgagagttgtgggaggcagagacacttactgat
catataaagttcgaccatggatacactgctaagagccctgccattgttaatttacttaca
attatgggagagttcactccggaacaacagagggccttctgtcagtttgttactggtgcg
cccaggctcccacctggtgggctggcagttctaaatccaaaactaacaattgtgaggaag
ctgtcgtcgactgcagtaaatacttcatataatgggattgtgcattcagaatcagcagat
gatgacttgcccagtgttatgacatgtgctaattacttgaagcttcctccttattctacc
aaggaaattatgtacaaaaagctactctatgcaatcagtgaaggccagggatcctttgat
ttatcgtga
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integrated database retrieval system
