Pisum sativum (pea): 127087001
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Entry
127087001 CDS
T08598
Name
(RefSeq) uncharacterized protein LOC127087001 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
psat
Pisum sativum (pea)
Pathway
psat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127087001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psat03000
]
127087001
03019 Messenger RNA biogenesis [BR:
psat03019
]
127087001
04121 Ubiquitin system [BR:
psat04121
]
127087001
Enzymes [BR:
psat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127087001
Transcription factors [BR:
psat03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
127087001
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127087001
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127087001
Ubiquitin system [BR:
psat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127087001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
zf-RING_2
Rtf2
zf-UDP
Motif
Other DBs
NCBI-GeneID:
127087001
NCBI-ProteinID:
XP_050883790
LinkDB
All DBs
Position
5:complement(609379746..609387681)
Genome browser
AA seq
1006 aa
AA seq
DB search
MSDEGERTCPLCAEEMDLTDQQLRPCKCGYQICVWCWHHIMDMAEKDNTEGRCPACRSPY
DKEKIVGMAANCERLVAEVHMERKMKSQKAKSKSSEGRKQLNDVRVIRRNLVYIVGLPLD
LADEDLLQQREYFGQYGKVLKVSMSRTAAGVVQQFPNSTCSVYITYSKEEEAVRCIQNVH
GFVLEGRPLRACFGTTKYCHAWLRNMPCNNPDCVYLHEIGSQEDSFTKDEIVSAYTRSHV
QHITGAATNMERRSGNVLPHPLDDCTSNNSEKPIAKNTSSNSVSTVRGSPPNGSPAKPMA
PPAAWGLRATNCQPAAGGLSCPTGLSKPKPDSISSTLPFSSAVASTNQVSKHNESIKRQV
SSDGRHSIVPGEKNNTMNVLASASEKTLASDVSLAPVNSNTQLSSIPLARDGCTTSNTTK
SMDITSNSNGSFCPEEVVAATNEEIQNLSYGLSSLDLDRNVLNEHYNVTKPSSPPTDYVL
VKSMQSQGSEHIDKFRNVVNTTNAASKASISDSEVCKSKQYDLKLDSQSKLASGYVEVED
DATSFDSQRLKDPEVVSHSYLPRSCFPYVTNHNNPHPLQHGEPCTVVNTGSLATDNEVGY
ESQLHGSKALCDGYSEKLDSTSSYSLLHDESNDHHIGRLISKTVNIGNDAATTDNGESSI
ISNILSMEFDAWDDLAKLLSDSTENQNGPLKKSSSWNVQTNQSRFSFARQEESKIQAFDM
NPSHGANQQLLRSRSLIQDFVETTDVSLDKVGIAYGFPANNIEESENLSSGQFVASSNKL
SANSKPQISAPPGFSVPSRPPPPGFSSHERMGQTFDSISGNSLPDPFLWRNSYQTPSTGN
FGGAGDIEFMDPAILAVGKGRLQGALNSPTLDMQSNYTPQLNYLENEARLQLLQRSLSPQ
HNHRFSEIGNTFSQLGDPYGVSSRIDQSHVSNLATFPQLSLQQSRNAVLSNGNWDGWNEL
QNGNRMGMAELLRNERPEFSKFYRGYDDSKYQMPNSGDLYNRTFGI
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgaaggagaaaggacttgtcccctctgcgcagaagagatggatttgacagat
cagcaattgagaccatgcaaatgtggctaccagatttgcgtctggtgttggcatcacata
atggacatggctgagaaggacaacacagagggacggtgccctgcatgtcgttctccatat
gataaggaaaagattgtcgggatggctgcaaactgtgagagattggtggctgaagttcat
atggaaagaaagatgaagagccaaaaagcaaagtctaaatcatctgaaggacggaagcag
ctcaatgatgttcgagttattaggaggaatcttgtttacatagtggggttgcctctcgac
ctggctgatgaagatcttctccagcagcgagagtattttggtcagtatgggaaggtctta
aaagtgtcaatgtctcggacggcagctggtgttgttcagcagtttccaaacagtacatgt
agtgtttatattacttattcaaaggaagaagaagcagttcgatgtattcaaaatgtacat
ggatttgttttggagggtagacctttaagggcttgtttcggaacaactaaatactgccat
gcatggctcagaaacatgccttgtaacaatccggattgtgtgtatcttcatgagattggc
tctcaagaagacagtttcaccaaagatgaaatagtttcagcatacactagaagtcatgtt
caacatattactggtgctgcaaccaatatggaacggcgttcagggaatgtattgcctcat
ccgttggatgattgcacgagcaacaattcagagaaacccattgcgaaaaatacttctagt
aactctgttagcacggtaagaggttctcctcctaatggaagtcctgcaaagcctatggct
cctcctgctgcatggggtttgcgggctacaaattgtcagccagctgctggtggtctatca
tgtcctactggactgtccaagcccaagcctgattctatcagcagcacactacccttttcc
tctgctgttgcaagcacaaatcaagtttctaagcataatgagtcaataaagaggcaagtg
tcaagtgatgggcgtcatagtatagtgcctggagaaaaaaataacactatgaatgtcctg
gcgagtgcaagtgaaaaaactttggcttctgatgtttctcttgcacctgtgaattcaaac
acccaattgtcttctataccattagccagagatggttgtacaacatcaaacacaacaaag
tctatggacatcacatcaaattcaaatggcagcttttgtcccgaagaagtggttgctgct
accaatgaagagattcaaaatttgtcatatgggctgtcctctcttgaccttgatagaaat
gtcctaaatgaacattataacgtaaccaaacctagcagcccgcctactgattatgtattg
gttaagtctatgcaatctcaaggatcagaacatattgataagtttagaaatgtggtaaat
acaacaaacgcagctagtaaagcctctatatcagatagcgaggtctgtaaatcaaaacaa
tatgatttaaaattggattctcaatctaagctagcatctggttatgttgaagtagaagat
gatgcgacatcttttgatagtcagagactcaaggatccagaagttgttagtcattcttat
ttgcctaggtcatgtttcccttacgtcacaaatcataataatcctcatcctctgcagcat
ggtgaaccttgtactgttgtaaatactggttctttagccacagataatgaagttgggtat
gaatcacagttacatggatctaaagcattatgcgatggctattctgagaaattagacagt
accagctcttacagtttgcttcatgatgaaagcaatgatcatcacattggaagattaatt
agtaaaacagttaatattggaaatgatgctgccacaacagataatggtgagagtagtata
atttcaaatatattgtccatggagtttgatgcctgggatgatttggcgaagctgttaagt
gacagcaccgaaaatcagaatggtccgctaaagaaatctagttcttggaatgttcaaacc
aatcaatcaagattttcttttgcaagacaagaggagtccaaaatccaagcctttgatatg
aatccctctcatggtgccaaccaacaattactcagaagccgctcactcatccaagatttt
gtggaaacaacagacgtgtctttggacaaggtgggtattgcatatggctttcccgccaat
aacattgaggaatctgaaaatctaagcagtggtcagtttgttgcttcttccaataagctt
tctgctaactcaaaaccacaaatttcagcgcccccaggattttcagttccaagcaggcca
ccacctcctgggttttcttctcatgaaagaatggggcagacttttgactcaatttctggg
aattcattgcctgaccctttcttgtggagaaattcatatcagacaccatcaactggaaat
tttggtggtgcaggagacattgagtttatggatccagctattttggcagttggtaagggg
aggcttcaaggtgcgctaaacagcccaacactagacatgcaatccaattacaccccacaa
ttaaattaccttgagaacgaagccagacttcagttattgcaaagatctctctcaccacaa
cataaccatcgattttcggaaattggaaacacattttctcagcttggtgatccttatgga
gtttcttcacggatagatcaatcacatgtcagtaatctggcaacatttcctcaactgtct
ctccagcagtctagaaatgctgtcttgtcaaatggcaattgggatgggtggaatgaattg
cagaatggaaataggatgggtatggccgagcttttaagaaacgaaagacccgagtttagt
aagttttatagaggatatgatgattcaaaataccagatgccaaattctggggatctatac
aacaggacatttgggatttga
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