Lathyrus oleraceus (garden pea): 127087083
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Entry
127087083 CDS
T08598
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127087083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127087083
03009 Ribosome biogenesis [BR:
psat03009
]
127087083
04131 Membrane trafficking [BR:
psat04131
]
127087083
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psat04147
]
127087083
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
127087083
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
127087083
Membrane trafficking [BR:
psat04131
]
SNARE
SNARE associated proteins
Others
127087083
Autophagy
Aggrephagy
Other aggrephagy associated proteins
127087083
Exosome [BR:
psat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127087083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
Vps4_C
AAA_16
AAA_2
NPHP3_N
RNA_helicase
AAA_14
AAA_22
Viral_helicase1
AAA_5
AAA_33
AAA_28
Parvo_NS1
ABC_tran
NACHT
DUF815
TIP49
Mg_chelatase
AAA_lid_PRS2_C
nSTAND3
ATPase_2
AAA_7
IstB_IS21
AAA_17
NB-ARC
AAA_18
Molydop_binding
TsaE
Motif
Other DBs
NCBI-GeneID:
127087083
NCBI-ProteinID:
XP_050883892
LinkDB
All DBs
Position
5:complement(615628650..615631148)
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AA seq
475 aa
AA seq
DB search
MSQPESSDSKSVKKDFSTAILERKKSPNRLVVDEAVNDDNSIVAMHPQTMETLGLFRGDT
VLIKVDLERIGKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTN
EHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS
PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQS
APCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDII
DPALLRPGRLDQLIYIPLPDEDSRHSIFKSCLRKSPIAKDVDLRALAKYTQGFSGADITE
ICQRACKYAIRENIEKDIEQERKRKENPEAMDEDLIDEEVAEIKAAHFEESMKYARRSVS
DADIRKYQAFAQTLQQSRGFGSEFRFSDTGNRTTTESDPFATTAAGGAEEDDLYS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaccagaatcatctgattcgaaatcggtgaaaaaggacttctccaccgcgatt
ctggaacgcaagaagtctcctaaccgacttgtcgttgatgaggctgtcaacgacgacaac
tccattgtcgctatgcacccacaaaccatggaaaccttggggcttttccggggtgacact
gtccttatcaaggttgatttggaaagaattggaaaagatactcatgggtatgttggggct
gaccttgctgccctttgcactgaagcggctttgcaatgcattagggagaagatggatgtc
attgatttagaggatgaaacaattgatgctgaaattttaaattccatggccgttacaaat
gaacatttccagactgcccttggaacaagcaacccttctgctttacgtgaaactgttgtt
gaggtgcctaatgttagttgggaagacatcggaggccttgagaatgtcaagcgtgaactg
caagagactgttcaatatcctgttgagcacccggaaaagtttgagaagtttgggatgtca
ccatcaaaaggagttctcttctatggtcctccaggatgtggaaaaacattgttagccaaa
gcaattgctaacgaatgtcaagctaacttcatcagtgtgaaaggcccagaattgcttaca
atgtggtttggtgaaagtgaagccaatgttagagaaatttttgacaaggccagacaatca
gctccatgtgtcctcttttttgatgagcttgactccattgctactcagagaggaagtagt
gttggggatgctggtggtgctgccgacagagttctaaatcaacttctgactgaaatggat
ggcatgtctgctaaaaagactgtgttcattatcggggcaactaacagacctgatatcatt
gatcccgcacttctccggccaggccgtctagatcaattgatctatattcctcttcctgat
gaggattcccgtcattcgatcttcaagtcctgcttgagaaagtcaccaattgcaaaagat
gttgatttgagagcattggctaagtatacacaaggtttcagtggtgccgacattacagaa
atatgccagcgagcatgcaaatatgctataagagaaaacattgaaaaggacatagagcaa
gagaggaaaaggaaggaaaaccctgaggccatggatgaagaccttattgacgaagaagtt
gcagagatcaaggcggctcatttcgaggagtcaatgaagtatgcacgtaggagtgttagt
gacgccgatatacgcaaataccaagcatttgctcaaaccttacaacaatcgagagggttc
ggaagtgaatttaggttctcagatactggaaatagaactactactgaatctgaccctttt
gcaactactgctgctggtggagctgaggaagatgatctgtatagttag
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