Lathyrus oleraceus (garden pea): 127087194
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Entry
127087194 CDS
T08598
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
psat
Lathyrus oleraceus (garden pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psat04131
]
127087194
04121 Ubiquitin system [BR:
psat04121
]
127087194
Enzymes [BR:
psat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127087194
Membrane trafficking [BR:
psat04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127087194
Ubiquitin system [BR:
psat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127087194
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
Rad50_zn_hook
zf-ANAPC11
zf-RING_5
Zn_ribbon_FGT1_2
zf-RING-like
HypA
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
127087194
NCBI-ProteinID:
XP_050884018
LinkDB
All DBs
Position
5:complement(622153621..622155039)
Genome browser
AA seq
348 aa
AA seq
DB search
MNSDTLPSSTASFWCYSCTRFVHLLDHNDVVCPHCTSGFVEEIHAGNSPAVSLFADGIHS
SRRQNSRRRRRNAGNRSPFNPVIVLRGPREDGGGGGESEGSSFELYYEDGNGADLRPLPP
NMSELLLGSGFDRLLEQFSQIEINGFGRAENPPASKAAIESIPTVDITDAEVEEETHCAV
CKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLSGQTD
EEAVGLTIWRLPGGGFAVGRFTGGRRAGEIQLPVVYTEMDGGNNSNEDSRSISLAVGSNR
VRERRGIRRIFRNFLSFFGSVNLNRSFSGSGSLFSRSSRRRSRTWVTE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaactcggacacgcttccctcttccacggcgtcgttttggtgctatagttgcacacgt
ttcgttcaccttttggatcataacgacgtcgtttgtccgcactgtacaagcggttttgtg
gaagagattcacgctggtaactctccggcagtttccttatttgccgacggaattcattct
tcgaggagacaaaactcccgccggagacgtcgcaacgctggcaatagatcgccttttaat
cctgtaatcgtgcttcgcggacctagggaggacggcggcggtggcggtgaaagcgagggg
agtagctttgaattgtattatgaagacggcaacggtgccgatctacgtccgcttccgcct
aatatgtccgaactattgcttggttccggcttcgatcggttgcttgagcaattctctcag
atcgaaatcaacggtttcggtagggcggagaatccgccggcgtcaaaggcggcgatagag
tcaataccaacggttgatatcaccgacgcagaggtagaagaagaaacgcactgtgcggtt
tgcaaggaagcattcgagcttggttcagaggcgcgtaagatgccgtgcaagcacctttac
cattctgattgcattctcccatggctgtctatgcgaaattcgtgcccggtctgccgccac
gagttaccttccgatcaaagccaaaatccctcggagactagattatctggtcagactgac
gaagaagcggttggattgacgatatggagattacctggaggcggattcgccgtcgggaga
ttcaccggtggtcggagagccggtgagattcagttaccggttgtttacacagagatggac
ggcggtaataactctaacgaagattctagaagcatctctttggcagtgggaagcaataga
gttagagagagacgtggaattcgcagaatttttcgaaattttctatccttttttggttcc
gttaatttaaaccgtagcttttctggttctggttcattgtttagtagaagttcacggaga
agaagcagaacttgggtcacggaataa
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