Pisum sativum (pea): 127087377
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Entry
127087377 CDS
T08598
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
psat
Pisum sativum (pea)
Pathway
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127087377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psat03041
]
127087377
03009 Ribosome biogenesis [BR:
psat03009
]
127087377
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127087377
Spliceosome [BR:
psat03041
]
Complex A
U1 snRNP components
U1 related factors
127087377
Complex B
127087377
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
Pre-60S particles
Helicases
127087377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Motif
Other DBs
NCBI-GeneID:
127087377
NCBI-ProteinID:
XP_050884220
LinkDB
All DBs
Position
5:631330924..631336614
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AA seq
502 aa
AA seq
DB search
MSRYDSRSSDPTSYRDRRSDSGLGGGGASAAAPSSRRDYDDGGSGSPKKINLDGLPHFEK
NFYNESPSVRAMTEAEVNEYRLRREITVEGKDVPKPVKSFSDAAFPEYVLEEVKKAGFVE
PTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPT
RELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNH
TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYN
PYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQIT
RQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDF
PGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSSELAAMGRGA
PPPPSGGFRDRGKSFGSGRPWS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgatagccgttcctccgaccccacttcctaccgtgaccgaagaagtgac
tcggggttaggtggtggaggagcttctgctgctgcgccttcgagtagaagagactacgat
gacggtggctctggttctcctaagaaaattaatttggatgggttacctcattttgagaaa
aatttctacaatgaatcgccttctgttagggcaatgaccgaggctgaagttaatgagtat
cgtcttcgccgcgaaattactgttgaaggcaaagatgttcctaaacctgttaaatccttt
tctgatgctgcttttccagaatatgtactggaagaagttaaaaaagctggttttgttgag
cctacacccattcagtcccaaggttggccaatggctttgaagggacgtgatctaatagga
attgcagagacaggatcaggaaagacacttgcttatttgttgccggccatagtgcatgtt
aatgctcagccaattctagatcctggggatggacctattgtgttagttttggctcctaca
cgtgaacttgccgttcaaatacaacaagaggctactaaatttggtgcatcatctaggatt
aagagcacatgcatttacggtggggttcctaaggggcctcaagtgcgtgatctacagaaa
ggtgttgaaattgtaattgccactccgggaaggttaattgatatgctcgagtcaaatcat
actaacttgcgaagggtcacatacctggtattggatgaagctgataggatgctggacatg
gggtttgatccccagatacggaaaattgtctctcagattcgtccagaccgtcaaactttg
tattggagtgctacttggccaaaggaggttgaacaattggcaaggcagttcctttacaat
ccatacaaagtaattataggttctgaagatttaaaagctaaccatgctataaagcaatat
gttgacattgttcctgaaaagcaaaaatatgataaattggtgaagttgttggaggacatc
atggatggaagtcgaatattgatattcatggatactaaaaaaggatgtgatcagattact
aggcagcttcgcatggatggttggccagcactttcaattcatggagacaaaagtcaagca
gaaagagattgggtgctttcagagtttaaatctggaaagagtcctataatgaccgcaaca
gatgttgcagctcgtggtttagatgtgaaggatgtgaaatacgtcataaattatgacttc
ccgggatcactagaagattatgttcatcgaattggaaggactgggagagctggtgcgaaa
ggcactgcatacacattctttacagctgctaatgccagatttgcaaaggaacttataagc
atacttgaggaagctggacagagagtgagttctgagctggcagcaatggggcgtggcgca
cctcctccgccttcagggggcttccgagaccgtgggaagagttttggcagcggtcgtcca
tggagctga
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