Lathyrus oleraceus (garden pea): 127087594
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Entry
127087594 CDS
T08598
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127087594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psat03400
]
127087594
Enzymes [BR:
psat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
127087594
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
127087594
DNA repair and recombination proteins [BR:
psat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
127087594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
NFACT_N
Ribosomal_S13
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
127087594
NCBI-ProteinID:
XP_050884459
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All DBs
Position
5:complement(644381103..644387635)
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AA seq
391 aa
AA seq
DB search
MPELPEVEAARKAVEENCIGKKITKCIVADDSKVIDGVSHSEFEASVIGKTIVAARRKGK
NMWLQLDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNDEDEWPSKYSKFFIQLDDGLEI
SFTDKRRFAKVRLLKDPTSVPPISELGPDALFEPMTLDEFTGRLHKKKTEIKALLLDQSY
ISGIGNWVADEVLYQARIHPQQSASSLSGENCSTLYECIKEVIEKAVEVGADSSQYPTNW
IFHFREKKPGKAFVDGKEINFITAGGRTTAYVPELQKLSGPQKLKETGKARGKTSKKARV
DDDNNDDIENPTKKEDQTLGKKGAKAGAKGREASKRKKTEESDDDNDGDTGTDNDDDSDQ
VEKRKPAPAKKQSKKSVQSNQNSRSARSKAK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctaccggaggtagaggcggcaagaaaagcggtggaagagaactgtatcggg
aagaagataaccaagtgcatcgttgccgatgattcaaaagtcatcgacggtgtttctcac
tccgaatttgaagcttccgtcatcggcaaaaccattgtcgcagctcgccggaagggcaag
aacatgtggcttcagctcgattctccgccgtttccttccttccaattcggtatggctggt
gcgatatacatcaagggagttgcagtaacaaagtacaaaaggtctgctgtaaatgatgag
gatgaatggccttccaaatattcgaagttttttattcagctagatgatggtttggagata
tctttcactgacaaaaggagatttgcaaaagttcgcctgctcaaagatcccacatcagtg
cctcccatatccgagcttggtcctgatgcactctttgaacccatgacacttgacgaattc
actgggcgtttgcacaagaagaaaactgaaatcaaggctttattactagatcaaagctat
atttcaggtattggaaattgggttgcagatgaagtgctctaccaagcaaggattcatcca
cagcagtcagcttctagtttgtcgggagaaaactgctcaactttgtatgagtgcattaaa
gaggttattgaaaaagcagttgaagttggagcagatagtagccaatatcccactaattgg
atatttcactttcgtgaaaagaagcccggcaaagcttttgttgacgggaaagaaattaac
ttcatcaccgcaggtggtaggacaactgcgtacgtgccagagctgcaaaagctaagtgga
ccgcaaaagttaaaagaaactggtaaagctagagggaaaacctcaaagaaagcaagagta
gatgatgataacaatgatgacattgagaatcctacaaagaaggaagaccagactttggga
aagaagggggcaaaggctggagctaaaggtagagaagcttctaaaagaaaaaagacagag
gaaagtgacgatgacaatgacggtgatactggtactgataatgacgatgacagtgatcaa
gttgaaaagaggaaaccagctccggccaagaagcaatcaaagaaaagtgttcaaagcaat
caaaatagtaggagtgctaggagcaaagctaagtag
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