Lathyrus oleraceus (garden pea): 127087782
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Entry
127087782 CDS
T08598
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127087782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psat03021
]
127087782
03036 Chromosome and associated proteins [BR:
psat03036
]
127087782
Transcription machinery [BR:
psat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127087782
Coactivators
SAGA/TFTC/STAGA complex
127087782
Chromosome and associated proteins [BR:
psat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127087782
STAGA complex
127087782
TFTC complex
127087782
SAGA complex
127087782
SLIK complex
127087782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
Ge1_WD40
LisH
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_DCAF12
PALB2_WD40
Cytochrom_D1
WD_LRWD1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
127087782
NCBI-ProteinID:
XP_050884668
LinkDB
All DBs
Position
5:complement(92032572..92041215)
Genome browser
AA seq
669 aa
AA seq
DB search
MDEDEILGYVTAYLKKKGFKQTEKVFQEESQQNKSSSSSNTPLEPDIANHLLAFSQLENG
PGRYHNGYSRLRTWTYSSLDLYRHELLRVLYPVFIHCFMDLVAKGHIQEARNFFNTFRED
HELMHLRDIQKLEGVLSPTHLKEMEFAHSLRQSKFNIKICEYSYELLLQHLHSTQSTTIL
GIVNEHINFQVTSGQPSLISDDPEAVTLIGSSQEAANQTNQKEIHWGLLEDSLEERLEKA
GALLSDSEKGDGETKEGENDESKKRSIEVGKQGSSVKKIKKDKGGSATGKSAKPEVSTVS
AAPRVKPELPLPTIPTEVEHSILEDLRNRVQLSSAALPSVSFYTFINTHNGLSCSSISHD
GSLVAGGFSDSSLKIWDMAKLGQQPSSSLSQGDNDTAQNEQTLGKSDGKRQYTLFQGHSG
PVYAASFCPVGDFLLSSSADSTVRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASCS
HDRTARVWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRV
FVGHRGMVLSLSMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLVGHTSCVWSLAFSSEGS
ILASGSADCTVKLWDVNTSTKVSRIEEKNGNANRLRSLKTLPTKSTPVNALRFSRRNLLF
AAGALVKNV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatgaaattctcggatacgttactgcatacttgaagaagaaagggttcaaa
caaacggaaaaggtttttcaagaagaatctcagcagaacaaaagcagttcctcctcgaat
acccctctcgaacctgacattgccaatcacctccttgcattctctcagttggagaatggt
cctggtaggtatcataatgggtatagtaggttaagaacatggacttattcttcactagat
ttatacaggcatgagttgcttcgtgtgctttatcctgtgtttatccattgctttatggat
ctcgtcgcgaaagggcatattcaagaagctaggaattttttcaatactttccgtgaagac
catgaattgatgcacttacgtgacattcaaaagttggaaggagttctttctcctactcat
ttgaaggaaatggaattcgctcattcactaaggcagagcaaattcaacataaagatatgt
gagtattcctatgaacttctgctgcaacatctacacagtactcaatccactactatactt
ggtatagtcaacgagcatattaacttccaagttacctctggacaacctagcttgatttcc
gatgatccagaagctgttacccttattggaagcagccaggaagcagcgaaccagacaaac
cagaaagaaatacactgggggttgcttgaagactcgctagaagaacggttagaaaaggcc
ggggccttgctttcagactctgaaaagggtgatggggagacaaaagagggggaaaatgat
gagagtaagaaaagatcaattgaagttggaaagcaaggttcttcagtcaaaaagataaaa
aaggacaagggtggaagtgcaacagggaaaagcgcaaagcctgaagttagcactgtatca
gcagctcctcgagttaaaccagaactccccttgcccacaattccaacagaggtagaacac
tccatccttgaagatttaaggaaccgtgtacaacttagtagtgctgcgctgccatcagtt
agcttttatactttcatcaatacacataatggtttaagctgttcatcaatatctcatgat
ggatcattggttgctggaggattttctgactcgtcactaaagatttgggatatggccaag
cttggacaacaaccctccagttctctttcacaaggtgacaatgatacggcacaaaatgaa
caaactcttgggaaaagtgacgggaagagacaatatacactgtttcaaggtcactcagga
ccggtttatgcagcctctttttgtcctgttggcgatttcctactttcgtcgtcagcagac
tcaacagttcgtttatggagcacaaagcttaatgccaatcttgtttgttacaagggccac
aattatcctgtctgggatgttcagtttagtcccatggggcactattttgccagttgttca
cacgacagaactgctagggtttggtccatggacaggatacagcccttaagaataatggct
ggacacttgtctgatgttgattgtgtccaatggcatgccaactgcaactacattgccact
ggttccagtgacaaaacagttcgactatgggatgtgcagagtggagagtgcgtccgggtt
tttgttggtcacaggggtatggtcttgtctttgtcaatgtctcctgatgggcgctatatg
gcatccggtgatgaagatggcacaatcatgatgtgggacctctcaagcggccgctgtgtc
acacctttggttggtcacacatcatgcgtctggtcactagctttcagttctgaaggttct
attctagcatctggatctgctgattgcaccgtaaagttatgggatgtaaatacgagcact
aaggtttcaagaattgaagaaaaaaatgggaatgctaacaggctcagatcgctcaaaacc
ctaccaaccaaatctactccggttaacgcattgcggttttctcgaaggaatcttcttttt
gccgctggagctcttgtaaaaaatgtttaa
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