KEGG   Lathyrus oleraceus (garden pea): 127087787
Entry
127087787         CDS       T08598                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
psat  Lathyrus oleraceus (garden pea)
Pathway
psat03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127087787
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psat03021]
    127087787
Enzymes [BR:psat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     127087787
Transcription machinery [BR:psat03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     127087787
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 127087787
NCBI-ProteinID: XP_050884674
LinkDB
Position
5:92223762..92230188
AA seq 1198 aa
MGHVGSSKDVSIAGLDMNDLLDDNIDMEMDIDLDEDPSNAEILNELGDDMVKYFCKKASM
MFFNEYGLISHQISSFNQFVTSGLQNTFNSFGDLSVTPGFDPSKKGDSEHYRYATVKFGN
VTLDRPKFWCGENNAQELKMLPRHARLQRMTYASKMKVNVHVEVYIPKKVRSDKFKTGKE
EYIDKETVMEESREITIGRLPVMVKSNLCWMSEVEKGDCEFDHGGYFLIKGAEKIFIAQE
QIFLKRLWVTTIPYWAVAYKSQMKRNRMVVKLVENSTFEGIQNGEKLLTVYFLSVEVPVW
ILFFALGVSSDKEIVDLIDYGKGDGRIENLLFASIREADEKCKAFRRGNNALLFLEERIK
GVQFPPPESINECLDMYVFPNIKGLKRKARYLAYMVKVLLLAYTGRRKTDNRDDFRNKRL
ELASELLEREIRVHFAHARKRMAKALQRDLYGDRDVRQIEHYLDASIITNGLQRAFSTGA
WSHPFKRMERISGVVATLGRTNPLQTMAELRRTRQHVQYTGKVGDARYPHPSHWGKVCFL
STPDGENCGLVKNLSVTGVVSTHVTEPILPHLFDCGMEELVDDTTSVLGKKDKVFLNGDW
VGVCLNSASFVSELRNRRRRNELPNQVEIKRDQIQEEVRILSDAGRILRPLLVVSNLLKI
KESKSEHKSFQSLLDNGVIELVGPEEEEDFKTAWGVQYLFGKEGKSSVKYTHCELDMSFL
LGISCSMVPFANHDHARRVLYQSQKHSSQAIGFSTTNPNIRVDALSHQLFYPQRPLFRTM
TSDCLGKPGYLGQSKVLPKSEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEH
IRSYKAEIENKESSEKRKKPEDIVNFGKIQSKIGRVDSLDDDGFPFVGANLQSGDIIIGR
CADSGTDHSIKLKHTERGYVQKVVLSSNDEGKNFATVSLRQVRSPVLGDKFSSMHGQKGV
LGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLESALGKGIACVGSLRNATPFST
PSVEAITDQLHRAGFSRWGNERVYNGRTGEMVQSLIFMGPTFYQRLHHMSEDKVKFRNTG
PVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASSNLYERLFTLSDSSQIHICSKCKNV
ANVILRPVSGGRKIRGPYCRFCESADDIVVASVPYGAKLLSQELFSMGINLKFDTELC
NT seq 3597 nt   +upstreamnt  +downstreamnt
atgggtcacgtaggatcaagcaaagacgttagcatagcggggctagatatgaacgattta
ctcgacgacaacatcgacatggaaatggacattgacctagacgaagatccatccaatgct
gaaatcctcaacgagctaggcgatgatatggtgaaatatttctgcaaaaaagcttccatg
atgttcttcaacgagtacggtttgatcagtcaccagatcagttcgtttaatcagttcgtc
actagcggacttcagaataccttcaattccttcggagatctcagtgttactcctggtttt
gatccttctaagaaaggtgatagcgagcattatcgttacgccacggttaagtttggtaat
gtgactcttgatcgacctaagttttggtgcggtgaaaataatgctcaggagttgaagatg
cttcctagacatgctcgtcttcagaggatgacttatgcttccaaaatgaaagtgaatgtt
cacgttgaggtatatattccgaagaaggttcggagtgataaatttaagactggaaaagag
gagtacattgataaagagacggttatggaagagagcagggaaataactatcggtagactg
cccgttatggtcaagtctaatttgtgctggatgagtgaagttgaaaaaggtgattgtgaa
tttgaccatggaggctattttctgatcaagggtgctgagaagatttttattgcacaggag
caaatctttttgaaaaggctctgggtgacaactattccgtattgggcagttgcatacaag
tcacagatgaagagaaataggatggttgttaaattagtggaaaattccacttttgaagga
atccaaaacggggagaagctgctcaccgtatattttctgtccgtcgaggttcctgtatgg
atattgttttttgccctaggtgtctcatctgataaagagattgttgacctcatcgattat
ggaaaaggagatggaagaatagaaaaccttctctttgcatccatccgtgaggcggatgag
aagtgcaaagcattccgaaggggaaataatgctctccttttcctagaagaacgtatcaaa
ggtgtccagtttccaccgccagaatctattaacgagtgccttgacatgtatgtctttccg
aacattaaaggactgaaaaggaaggcacgctatctggcatacatggtgaaggttctttta
ctggcgtatactggccgccgaaaaactgataacagggatgactttcgaaataagaggctt
gagttggccagtgagctacttgaacgtgagattagagtgcactttgcacatgctcggaag
cgaatggcgaaggctctgcagagagacctctacggagatcgtgatgttcgtcaaattgag
cactatcttgatgcttctattattacaaatggtcttcaaagagcgttttctactggagcg
tggtcacatccttttaaaaggatggaaaggatttctggtgtggttgcaactcttggccga
actaatccattacaaaccatggctgaattaagaagaacaaggcaacatgttcagtacacg
ggaaaggttggggatgctagatacccgcatccttctcactggggtaaggtttgtttcctt
tctacccctgatggggaaaattgtggactagtaaaaaatttgtctgtcacaggagtagta
agtacccatgtaactgaacctatacttccgcacctgtttgattgtggaatggaagaactt
gttgatgatactaccagtgttcttggaaaaaaagacaaagtcttcctaaatggggactgg
gttggagtttgtttgaattccgcatcatttgtgtcagagctacgaaatcgaagacggaga
aatgaattgcctaatcaggttgaaattaaaagagatcaaattcaagaagaagtgcgcata
ttatctgatgcaggaaggattctccgaccgctcttggttgttagtaatctgctcaagatt
aaagaatctaagtcggagcataaatctttccagtccctgttggataatggcgtaattgag
ctggttggtcctgaagaagaagaggacttcaagactgcttggggtgttcagtatttattt
ggcaaagagggaaaatcttctgtgaagtacacgcattgtgagcttgatatgtcgttctta
ttgggtataagctgttcaatggttccatttgctaatcatgaccatgctaggagagtgttg
taccaatcccagaaacattcctcacaggctattggcttttctacgacaaacccaaatata
agagttgatgctttgtctcaccagttattctatcctcaaagaccgctatttcggacaatg
acatctgattgtcttggaaaacctggatatctaggtcaaagtaaagttcttccaaagtct
gaattctataatgggcagaatgcaattgtagctgttaatgtacatctcggatataatcaa
gaggattccttggtgatgaaccgtgcttctttgcagcgtggtatgttcagatctgagcac
atcaggagttacaaagctgagattgaaaataaggaatcttcagaaaagagaaagaaacct
gaagacattgtgaattttggaaagatacagagtaaaatcggtcgagttgatagccttgat
gatgacggctttccatttgttggtgcgaatttgcagagtggtgatattattattgggcgg
tgtgccgattcagggacagaccacagtataaagttaaaacacactgaaaggggttatgtt
caaaaggttgtgctgtcctcaaatgatgaggggaagaattttgctactgtttcgttaaga
caggttcgaagtccggttcttggagataagttctctagtatgcatggacaaaagggtgtt
ttaggatttctggagtctcaggagaattttcctttcactaaacaaggtattgttcctgat
attgtcataaatccgcatgcatttccctcaagacaaactcctgggcaactcctagagtct
gctttaggaaagggtattgcttgtgttggctcattgagaaatgctacccctttctccact
ccttctgttgaagccattaccgaccagcttcacagagctggcttttcaagatggggaaac
gaacgagtatacaatgggaggactggtgagatggttcaatcactaatatttatgggccca
acattctaccagcgactacaccacatgtccgaggacaaagtgaagttcaggaacaccggc
ccagttcacccgctaacccgacagccagttgctgacaggaagcgatttggaggtatcaag
tttggtgaaatggagcgtgattgcctgatcgcccatggtgcatcttccaacttgtatgaa
cgtctcttcaccctgagtgattcgtctcagatacacatttgtagtaaatgcaaaaatgtt
gcgaatgtgatcttgcggccggtatctggtggccggaaaatacgaggtccctattgccga
ttctgtgaatcagctgatgacattgtggtggccagtgttccatatggagcaaagttactg
tcccaggagctgttcagcatgggcattaacctcaaatttgacaccgagctttgctag

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