Lathyrus oleraceus (garden pea): 127090948
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Entry
127090948 CDS
T08598
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat04142
Lysosome biogenesis
psat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
127090948
04148 Efferocytosis
127090948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psat04131
]
127090948
Membrane trafficking [BR:
psat04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127090948
Hops complex
127090948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
VPS18_solenoid_2nd
Clathrin
TPR_Vps41
zf-C3H2C3
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
EIF3I
zf_RING_Vps8_fungal
Beta-prop_WDR3_1st
Beta-prop_RSE1_2nd
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
127090948
NCBI-ProteinID:
XP_050885382
LinkDB
All DBs
Position
6:complement(10272667..10278610)
Genome browser
AA seq
970 aa
AA seq
DB search
MYQWRKFEFFEEKYVANRMIPEEQEEDDTTVNNDEREKKERKIECCSSGRGKVVTGFDDG
TVCLFDRGLKFNYSFQPHSSSVLFLQQLKQRNFLVTIGEDEQLAAQQSALCLKVFDLDKM
QSESTSTASPDCVGILRIFTNQFPEAMITSFIVLEEVPPILLIAIGLDNGSIYCIKGDIA
RERITRFKLQVENHSDKTLSSITGLGFKVDGQSLQLFAVTPNSVSLFSLHDQPPRRQTLD
QIGCGVNSVAMSDRSEFIIGRPEAVYFYEVDGRGPCWAFEGEKKLVGWFRGYLLCVIADQ
RTGKHTFNIYDLKNRLIAHSALVKEVSHMLYEWGNIILIMKDKSALSIGEKDMESKLDML
FKKNLYTVAINLVQTQQADAAATSEVLRKYGDHLYSKQDYDEAMSQYIHTIGHLEPSYVI
QKFLDAQRIYNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNLFIKSEDSIGELK
FDVETAIRVCRAANYHEHAMYVAKKAGRHEWYLKILLEDLGNYEEALEYISSLESSQAGM
TIKEYGKILIEHKPLETIEILIRLCTDEGDKRGQSNGVYVSMLPSPVDFLSIFVHYPHSL
MGFLEKYTNKVKDSPAQVEINNTLLELYISNELNFPSVSQSNEGSDFLNGASEKLSNISA
QTNGTIADQKSSEKEKGRLERRKKGLHMLKSAWPPETEHPLYDVDLAIILCEMNAFRDGL
LYLYEKMKLYKEVITCYMQAHDHEGLIACCKRLGDSVGGDPSLWEDVLKYFGELGEDCSK
EVKEVLNYIERDDILPPIIVLQTLSKNPCLTLSVIKDYIARKLEQESKMIEEDRQAIDKY
QEDTQTMRKEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPE
CAPEYRSVLEMKRNLEQNSKDQDRFFQQVKNSKDGFSVIAEYFGKGIISKTSNGSTSGLR
SGNASSSSGF
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtggcggaagttcgaattcttcgaagagaagtacgttgcaaatcgcatgatt
ccagaggaacaagaagaagatgacaccactgtgaataatgatgagagagagaaaaaggag
aggaaaatcgagtgttgttcgagtggaaggggtaaggtagtaactggttttgatgatggg
accgtttgcttgttcgatcgaggactcaagttcaattattcttttcaacctcattcttct
tctgttctctttcttcaacagctcaagcaacgcaacttcctggtaacgattggggaagat
gaacagcttgctgcccagcaatcagctctgtgcctgaaggtttttgacttagataagatg
caatctgaaagtacgagcacagcgagtccggattgtgttgggatattgcgtatattcact
aatcagtttcccgaggcaatgattacatcttttattgtcttagaggaagtgcctcctata
ctactcatagctattggcttagacaatggttctatttactgcatcaaaggagatattgca
cgggagcgtatcacccgtttcaagcttcaggtggaaaaccattcagacaaaactctttcc
tcaatcactggtcttgggtttaaggttgatggtcaatcacttcagttgtttgcggtaacc
ccaaattccgtgagcttgttttcattgcatgatcaaccaccaaggaggcaaacccttgat
cagattggatgtggtgtaaacagcgttgcaatgagtgaccgttctgagtttataattggt
cggccagaggcagtatacttttatgaagttgatgggcgtggtccttgttgggcttttgaa
ggagaaaagaaattggtaggatggttccgcggataccttttgtgtgttattgcagatcaa
agaacaggaaagcatactttcaatatctatgacctgaagaatcgtttaatagcccacagt
gcactggttaaagaagtttctcatatgctctatgagtggggtaacatcatactcataatg
aaagacaaatcagctttatctattggggaaaaggatatggaaagcaagttagacatgtta
ttcaagaaaaacctatatacagtagcaattaatcttgttcagactcaacaagcagatgct
gcagctacttctgaagttctgagaaaatatggggatcacctatacagcaagcaagactat
gatgaggcaatgtcccagtacatacatactattggtcaccttgaaccttcttatgtgata
cagaagtttttggatgctcaaagaatctacaacctcacaaattacttggaaaagctacat
gagaagggtcttgcttctaaagatcacaccacacttctattaaactgttacaccaaattg
aaagatgttgaaaaattaaatctatttattaaaagtgaagatagcattggggaacttaag
ttcgacgtggaaacagcaatcagggtttgccgtgctgccaattaccatgagcatgcaatg
tatgttgcaaagaaagcagggaggcatgaatggtacttgaagatcttgcttgaagatctt
ggtaattatgaagaggccttggaatatatttctagtcttgaatcaagtcaagcagggatg
acaataaaggagtatggtaaaattctaatagagcacaagccgctggagacaattgagatt
ctcattaggctttgcacagatgagggtgacaaaagaggacagtcaaatggtgtgtatgtg
tctatgttgccatctcctgttgattttctcagcatcttcgttcattaccctcattccctt
atgggttttcttgaaaaatataccaacaaggtgaaggactcacctgctcaggtggagatt
aacaataccctgttagagttgtatatatccaatgaattgaactttccctcagtatcacaa
tctaacgagggttcagatttccttaatggagcatcagaaaaactttcaaatataagtgcc
caaaccaatggaactattgctgatcaaaaaagttcagaaaaggaaaagggtcgtcttgaa
aggcgtaaaaagggtctacacatgcttaagagtgcatggccgccagagacagaacacccg
ctttatgatgttgatttagccattatactatgtgaaatgaacgcattcagagacgggctt
ttgtatttgtatgaaaagatgaaactctataaggaagtaatcacttgctatatgcaagcg
catgatcacgagggattaattgcgtgctgcaaaagactgggtgattcagtaggaggggat
ccatctctttgggaagatgtactcaaatattttggtgagcttggagaagattgctcgaaa
gaagtaaaagaagttttgaattacattgagagagatgatattttgcccccgataattgtc
cttcaaactctatcaaaaaatccttgcctcacactttctgtgatcaaggattacattgca
cggaagcttgagcaggaatcaaagatgattgaagaggaccgacaagctattgataaatat
caggaagacacgcagactatgaggaaggagattcaagatcttaggacaaatgcaaggatt
tttcagcttagcaagtgcacggcatgcactttcaccctagatcttcccgctgtgcacttc
atgtgcatgcactcattccatttgcggtgccttggtgataatgaaaaagaatgccccgag
tgtgccccagaatataggtctgtattagagatgaaaagaaatttagagcaaaattctaag
gatcaggacaggtttttccagcaagttaagaactccaaagatgggttttctgtcattgcc
gagtattttggaaaagggattatcagcaaaacaagcaatggatccacttcgggtcttaga
tctggaaatgcatcatccagcagtggcttctga
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