Pisum sativum (pea): 127091154
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Entry
127091154 CDS
T08598
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
psat
Pisum sativum (pea)
Pathway
psat03022
Basal transcription factors
psat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127091154
09124 Replication and repair
03420 Nucleotide excision repair
127091154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psat03021
]
127091154
03400 DNA repair and recombination proteins [BR:
psat03400
]
127091154
Transcription machinery [BR:
psat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127091154
DNA repair and recombination proteins [BR:
psat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127091154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
SHOCT
Motif
Other DBs
NCBI-GeneID:
127091154
NCBI-ProteinID:
XP_050885668
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Position
6:complement(373647023..373664903)
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AA seq
586 aa
AA seq
DB search
MSSAHQVVKRAKYKTTVKDPGTPGVLKLTREKFVFKPNDPTSNNKLEADFRLIKNHKHTK
EGSNKPPWLNLAHSQGSYIFEFESFSDLHICRELVGSALSKHVEPSKVVSDEQLSASEMT
LRIKLLQEDSKLQKLHKELVASGKLTESEFWATKKKLLDQDESRKLKQRVGFKNSLIFDT
KPTSDGRINQVKFQLTPEIKHQIFTLKPAVHKAFLSFVPSKMSEVDFWNKYFRAEYLHST
KNAIAAAAEAAEDEDLAVFLKDDEILENEAREKVRRVDPTLDMEADQGDDYTHLPNHGIF
RDGSKETSEAQNTMYWRTLLQDLNRQSEVVLEGKTIDKDMEPPRTVAEVLARRKRRFDGV
IEEERLIRISKMAPIEDLQAQDDNAFAPLCIKDPRDYFDFQQENAVKSLDDSLAAKLKSR
SNLGYEEAYGSLRESISNIITMGLRDPLLSSDVAFKVLTGLTKNISSTKSNLGKSSQESA
LDILPNTTKEKLLDHWVCSQELLKHFWSSYPVTTQSLANKARRLKDAISQIYAKLEEIKV
SSQSDLRHQVSLVVHPMQQALDAALLHYEADLGKRNAKGSKPNGYV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggcgcatcaagttgttaagcgtgccaaatacaaaaccactgtcaaagatcct
ggcactcccggcgtactcaaattgactcgagaaaagtttgttttcaagcctaacgatcca
acatcaaacaacaagctcgaagctgatttcagattaattaaaaatcataaacacaccaaa
gagggatcgaacaaaccaccgtggcttaaccttgcacattctcagggaagttacatcttt
gagtttgaaagcttctcagatcttcatatttgccgggaattagttggtagtgcccttagc
aagcatgtagaaccctcaaaagttgtttctgatgaacagcttagtgcttctgaaatgaca
ctgagaattaagctattgcaagaagatagtaagttgcagaaacttcataaagaacttgtg
gctagtggtaagcttacagaatcagaattttgggctacaaagaagaaattgctcgaccaa
gatgaaagcagaaagttaaaacaaagggttggatttaaaaattctttgatcttcgacaca
aagcctactagtgatggtcggataaaccaggttaagtttcaattaacaccggagataaaa
catcagatttttaccctcaaaccagcagttcacaaggcatttctcagttttgtacccagt
aagatgagtgaggtagatttctggaacaaatactttagagctgaatatctccatagtacc
aaaaatgctattgcggcagctgctgaggctgctgaagatgaggatcttgctgtttttttg
aaagatgacgagatattagaaaatgaagctcgagagaaggttcgacgggttgatccgact
ttagacatggaagcagaccaaggagatgattacactcatcttccgaatcatgggatcttc
cgtgacggtagcaaggaaacatctgaagctcaaaatactatgtattggcgaacattgttg
caagatcttaatagacaaagtgaggtggttctcgaaggaaaaactatagataaagatatg
gaacctccaagaacagtggcagaagtgcttgctcggagaaaacggagatttgatggggtt
atagaggaggagaggctaatcagaatttctaagatggcaccgattgaggatcttcaggca
caagatgataatgcgtttgcaccactctgtatcaaggatcctcgtgactattttgatttt
caacaagagaatgcagtaaaatctttggatgattccctagctgctaagttgaaatcaaga
agcaatttgggttatgaggaagcctatggctctttgagggagtcgatatctaacatcata
actatgggattaagggatcctctattgagctctgatgttgcctttaaggtcctcactgga
ttgaccaaaaatatctcaagcaccaaatcaaatcttgggaaaagttcacaggagagtgcc
cttgatatattgcccaacacaactaaggagaaactactagatcattgggtttgcagtcag
gaattactgaagcacttttggtcttcctatccagtaacaacacaaagccttgctaataag
gccagaagactgaaagatgccatatcacaaatatatgctaaacttgaggaaataaaagta
tcttcacagtcagacctgcggcaccaggtttcacttgttgtccatccaatgcagcaggct
ctggatgctgccttgttacattacgaagctgatcttgggaaaagaaatgctaaagggtcg
aagcctaatggttatgtttag
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