Pisum sativum (pea): 127092823
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Entry
127092823 CDS
T08598
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
psat
Pisum sativum (pea)
Pathway
psat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127092823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psat03009
]
127092823
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
Pre-60S particles
RNases
127092823
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEDDh_C
XLF_CC
AAA_23
VKGC_lumenal_dom
Motif
Other DBs
NCBI-GeneID:
127092823
NCBI-ProteinID:
XP_050887672
LinkDB
All DBs
Position
6:complement(3212072..3217623)
Genome browser
AA seq
553 aa
AA seq
DB search
MDDKIDTAEKKVLVDIVKLVQRKGMKGKLGGWKDFLDTKDKKFGSCMSDPSKRSHEVLAD
FLKTFSTDEDLRYIGNIMRQHSNQYTMERLKDRSYDSPEQSLVQATLQHPRYTKEYSLPC
FDEGWLVIDIKKKSKGIKSTTMLAVDCEMVLCEDGTDAVVKVCVVDHNLEVKLHELVKPE
KAITDYRTTITGVSSKDLETVTRSLADIQKSMKKLLSSGAILVGHSLHNDLSVLKIDYPR
VVDTAYIFQPMDGSTNWRPSLNNLCQAVLGHGVREEGASHDCQDDACATMKLVLAKIKHG
VDKPFPLSLVQEPVSESEMSKLLIHRIPTFVNSETLHEIVPGDFTIERKPARSGKSDTYS
ASAIFKNQREAHEAYENLQGSQTADTSGRLQKFVTCHLSTGNVNVYVRKMEFDNHNKKRD
LQEDETLDASKNKKLKMDPEVEKDYALKALQGKHEIEKKVHLKKIESLNQRLKQSELEHL
KEIEALNQRLKESESEIESLKEQLRNQRSKESELEIESLKEQLRKKDFEINTLHRMVDNL
QKRRKPPITKAGM
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaagatagacaccgcagaaaagaaggtgctggttgatattgtaaaattggta
caacgcaaaggcatgaagggtaaactcggtggctggaaagacttcttggacactaaagat
aagaaatttggctcatgtatgagtgatccatcaaagaggtcccatgaagttttggctgat
tttctcaagacattctcaactgatgaggatttaaggtatattggtaacatcatgcgacag
cattctaatcaatacacgatggagcgactgaaagatagatcttatgattcccctgaacag
agtctagtccaagcaactcttcagcacccgcggtacacaaaggaatattcattgccatgt
tttgacgagggatggttagtgatagacattaaaaagaagtccaaggggataaaatccact
acaatgcttgctgttgattgtgaaatggttctttgtgaagatgggactgacgctgtagtc
aaagtttgtgttgtagatcacaatttagaggtcaaactacacgaacttgttaaaccagag
aaagcaatcacagactacagaacaacaattactggtgtctcttctaaggatctagagaca
gtgactcgctccttagctgatatacaaaaatcaatgaagaagttgttatccagtggagcc
atattagtgggacacagtttacataatgatctatccgtactaaagatagattatcctaga
gtggttgacactgcatacatcttccaacccatggatggatctactaactggagaccttct
ttaaataatttgtgtcaggctgtgttaggccatggagttcgggaagagggtgcttcacat
gattgtcaagacgatgcatgtgcaacaatgaaacttgttcttgcaaagattaaacatggc
gttgataagccatttccgttatcattggttcaagagcctgtttcagagagtgagatgtcg
aagctgcttattcacagaataccaacctttgtgaacagtgaaacactacacgaaattgtt
cccggagacttcacaatagaacgaaagcctgccaggagtggtaaaagtgacacgtattcg
gcctcagctatctttaagaaccaacgagaggcacatgaggcatatgaaaatcttcaaggc
agccaaacagcggatacaagtgggcgtctgcagaaatttgtaacatgtcacttgagtacg
ggcaatgtcaatgtatatgttcggaaaatggaatttgataatcacaacaaaaagagagat
ttacaagaggacgagacacttgacgcatccaagaacaagaaattaaaaatggatcctgaa
gttgaaaaggattatgccctgaaagctttacaagggaaacatgaaattgaaaagaaggtc
catttgaaaaagattgaaagtctgaatcaacgtttgaaacaaagtgaattggagcacttg
aaggagattgaagcactgaatcaacgattgaaagaaagtgaatcggagattgaatcgttg
aaggaacagttgcggaatcaacgatcgaaagaaagtgaattggagattgaatcattgaag
gagcaattgagaaaaaaagactttgaaatcaacactcttcatagaatggtagataacctt
caaaaaaggcgaaaaccacctataacaaaagcaggcatgtga
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