KEGG   Pisum sativum (pea): 127093347
Entry
127093347         CDS       T08598                                 
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4 isoform X1
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
psat  Pisum sativum (pea)
Pathway
psat03018  RNA degradation
psat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127093347
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127093347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psat03019]
    127093347
   03041 Spliceosome [BR:psat03041]
    127093347
Messenger RNA biogenesis [BR:psat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     127093347
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     127093347
Spliceosome [BR:psat03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    127093347
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 127093347
NCBI-ProteinID: XP_050888215
LinkDB
Position
6:complement(364246602..364248963)
AA seq 150 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGRGREDGAPGRQVKGAGRGFEE
GGARGPGGGRGRGGPGGRPGGNRGAGRGRG
NT seq 453 nt   +upstreamnt  +downstreamnt
atgctgccactctcccttctcaaaactgctcaagggcaccccatgttggttgaactcaaa
aatggagagacttataacggccatttggttaattgtgatacatggatgaacattcatctc
cgagaagtcatttgtacctctaaagacggagatagattttggcgtatgcctgaatgctac
attcgggggaataccattaagtaccttcgagttcctgatgaggttattgacaaagtccag
gaagaaaccaagagtcgcacggatcgcaaaccacctggtgtgggacgcggaaggggaaga
ggtagggaggatggcgctcctggacgtcaagtaaaaggagctggacgtggctttgaagaa
ggtggtgctagggggcctggaggaggccgaggaaggggtggcccaggtggaaggcctggt
ggaaacagaggtgcagggcgaggtagaggttga

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