Pisum sativum (pea): 127095155
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Entry
127095155 CDS
T08598
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
psat
Pisum sativum (pea)
Pathway
psat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127095155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127095155
03012 Translation factors [BR:
psat03012
]
127095155
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127095155
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127095155
Translation factors [BR:
psat03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127095155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
dsrm
HA2_N
nSTAND3
AAA_22
AAA_19
AAA_23
ATPase
Dicer_dimer
AAA_11
T2SSE
NPHP3_N
PhoH
Motif
Other DBs
NCBI-GeneID:
127095155
NCBI-ProteinID:
XP_050889842
LinkDB
All DBs
Position
6:476667415..476678760
Genome browser
AA seq
1199 aa
AA seq
DB search
MLPAPSIPKTLKPSFHLPFLAMKDRPSLSSHGAIYVPPHHRLRSVITSANSPTPVSAKLR
ENLTTIPTTIQTTLSDNKTNSRFVSAYDDVVSEVEVPSLPSGFPNDIMQEWKPKFTMLLN
DESKQELISREKKDRRDFDEISVLASRMGLYSHMYSKVAVFSKVPLPNYRYDLDERKPQR
EVSMPITVFRRVGAHFEEYLSQKPRINKSFSDLSSSDGSLGTDEGLFEQPEPPSSSKAVV
EKILWQRSLQMRDVQQAWQESSEGKRMLEFRSNLPAYNEKEAILSVISKNQVVIISGETG
CGKTTQIPQFILESEIESIHGAACNIICTQPRRISAMSVSERVAFERGEKLGESVGYKVR
LEGMKGRDTHLLFCTTGILLRRLLADRNLKGVTHVIVDEIHERGMNEDFLLIVLKELLPR
RPELKLILMSATLDAELFSSYFNGAPVVNISGFTHPVRTLFLESILETTGYRLTPSNQID
DYGQERLWKMNKQAPRKRKSQIASAVEDAIRSADFKDYSLQTQESLSCWNPDCIGFSLIE
YILCNICEDERPGAVLVFMTGWDDISSLKEKLQAHTVLGDPNRVLLLTCHGSMASSEQKE
IFEEPEDGVRKIVLATNIAETSITIDDVVFVLDCGKAKETSYDALNNAPCLHPTWISKAS
AHQVMLYFCCVSGIHFYNMFNLQCCRASFSMLPIMYTGRAGRVQPGECYHLYPRCVYDGF
AEYQLPEILRTPLQSLCLQIKSLRLGSISDFLSRALQSPEILAVQNAVEYLKIIGALDVN
ENLTILGHYLTKLPMEPKLGKMLLLGAILNCLDPILTVVAGLSVRDPFLTPLDKKDLAEA
AKSQFSGAYSDHLALVRAYEGWKVAEIDLGGYEYCWKNFLSFQSMKSIDALRREFKGMLT
DIGLVDSNTTSCNTWSYDVNLIRAVICYGLYPGICSVLHNEKSFTLKTMEDGQVLLYSNS
VNARETKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGSLSKGDADNHIKMLGGYL
EFFMEPTVADMHQSIRRELDDFIQSKLLSPTMSIHSHHNLLSAVRCLISNDSCEGRFVFG
RQVLKPSMKSVIPSQPASLVSRTESGPGGDNSKSQLQTLLTRAGYAAPVYKTKQLKNNQF
RSSVDLNGVEIMGQPCSNKKSAEKDAAAEALQWLMGKQAGCEYIDHMSMLLKKSKKDHN
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccgctccttccattcccaaaaccctaaaaccttcatttcatcttccatttctc
gccatgaaggaccgcccctcgctgtcctcccatggcgctatctacgttcctccgcaccac
cgtctccgctccgtcatcacctccgctaactcccccactccagtttccgccaagctccgc
gaaaatctcacaaccatacctactactattcaaaccaccttatcagataacaagacgaat
tcgcggtttgtttctgcttacgacgacgtcgtttccgaagttgaagttccttcactaccg
agtggtttccccaatgatatcatgcaggagtggaaaccaaaatttacaatgctcttgaat
gatgagagtaagcaagagttgatttcaagggagaaaaaagataggcgtgattttgatgaa
atatcagttttggctagtagaatgggcttgtatagccatatgtattcaaaggttgctgtc
ttcagtaaggtgccacttcctaactatagatatgatttggacgaaaggaagcctcagagg
gaggtgagcatgcctatcactgtgttcaggcgggttggtgcacattttgaggaatacctt
agtcaaaagcccaggataaacaaaagcttttcagatttgtcaagcagtgatggcagtctt
ggtacagatgaagggctttttgaacagcctgagccgccatcatccagtaaggctgttgtg
gagaaaattctctggcagagaagcttacaaatgcgagatgtgcaacaagcttggcaggag
tcatctgaaggaaaaagaatgctagaatttcgaagcaatctccccgcttataatgagaaa
gaagcaatattatcggtcatatcaaagaatcaggtagtcatcatttcaggcgaaacaggt
tgtggcaagacaacacaaattcctcaatttattttagagtctgagatagaatcaattcat
ggagctgcttgtaatattatatgcacacagccaagacgcatttcagccatgtctgtttca
gaaagggttgcttttgagagaggggagaaattgggtgaatctgttggatataaagttcga
ctggagggaatgaaagggagagatacccatcttctcttttgcaccacaggcatcttatta
agaagattactggctgatagaaaccttaaaggtgtaactcatgttattgtcgatgaaatt
catgaacgtgggatgaatgaagattttttgcttattgtccttaaagaactccttccccgt
cggcccgaactcaaactgattttgatgagtgctaccctagatgcagagctcttctcttca
tattttaatggggctccagtagtgaatatatcgggctttacacaccctgttagaactctc
tttttggagagcattcttgaaacgacgggctatcgattgactccttctaatcaaattgat
gattatggccaagagaggttgtggaaaatgaacaaacaggccccaagaaagaggaaaagt
caaattgcttctgccgtggaggatgcaattagatctgctgatttcaaagattacagcctt
cagacacaggagtctttgtcatgttggaatccagactgtattggttttagtctcatagaa
tatatcctgtgcaatatttgtgaggatgaaaggcctggcgctgttttggttttcatgact
gggtgggatgatatcagctctctgaaagagaagctccaagcacatactgtcttgggagat
ccaaaccgtgttttgttgcttacgtgtcatggctcaatggctagttcagagcaaaaagaa
atatttgaagagcctgaagatggagtgagaaaaatagtgctagcaacaaatattgctgaa
acgagtatcacaatagatgatgttgtttttgttctggactgtggaaaagcaaaagaaaca
tcatatgatgcactgaataatgcgccttgtttgcatcctacatggatctctaaggcttct
gctcatcaagtaatgttatacttttgttgtgtatctggcattcacttttataatatgttc
aatttacaatgttgccgagcatcgttttctatgctgccaatcatgtatacaggaagagct
ggccgtgttcaacctggagagtgttaccatctctatcctagatgtgtatatgatggtttt
gcagagtatcaattgccagaaattttgagaacacctttgcagtctctctgtttacaaatc
aaaagtctaagacttggaagtatatctgacttcttgtctagggctttgcagtctcctgag
atactcgcggtacaaaatgcagttgaatatctaaaaataattggggctttggacgtgaat
gagaatctgacaattctaggacactatttgacaaagcttcctatggaacccaaacttggc
aagatgcttctattaggtgctatcctcaattgcctggatcccatattaactgttgttgct
ggtcttagtgtgagagatccttttctaacaccactggataaaaaagatcttgccgaggcg
gcaaaatctcaattctctggtgcatacagtgaccacctagcacttgtgcgcgcttatgag
ggttggaaagttgctgagatagacctgggtggatatgaatattgttggaaaaactttctt
tcattccaatccatgaaatctattgatgctcttcggagggagttcaaaggcatgcttaca
gatattggattagttgatagcaacacaacaagctgtaacacatggagctatgatgtgaat
cttatccgggcagttatttgctatggtctatatcctggaatttgttctgtgctgcataat
gagaagtcattcactttgaaaacaatggaggatggtcaagtgctcttatattcgaactcg
gttaatgcccgggaaactaaaattccatatccgtggttagtttttaatgagaagataaaa
gtgaactcagtttttctccgtgactcaacagccgtgtctgattcagtagtgcttttgttt
ggtggaagcttatcaaaaggagatgctgataatcacataaaaatgttaggaggatatctg
gagtttttcatggaacctactgttgctgatatgcatcagagtataaggagagaacttgat
gacttcattcaaagcaaactactttctccaacaatgagcatacactcgcatcataacctc
ctatccgcggtacggtgtctgatttccaacgactcatgtgaaggcagatttgtatttggt
cgccaggtccttaaaccatcaatgaaatccgtgatcccctcacagccagcatcattggtt
tcaaggacagagagtggacctgggggtgataattctaagagtcagctccaaactttgctt
acaagagcaggatatgctgcacctgtctacaagactaaacagttgaagaacaaccagttt
cgatcttcagttgacttaaatggagtggagataatgggtcaaccttgtagcaataaaaag
agtgcagaaaaagatgctgcagctgaagcactgcaatggttaatgggcaagcaagctggc
tgtgaatatatcgatcacatgtcgatgttgctgaaaaaaagtaagaaggatcacaattaa
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