Pisum sativum (pea): 127096522
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Entry
127096522 CDS
T08598
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
psat
Pisum sativum (pea)
Pathway
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127096522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psat03041
]
127096522
03009 Ribosome biogenesis [BR:
psat03009
]
127096522
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127096522
Spliceosome [BR:
psat03041
]
Complex A
U2 snRNP components
U2 related factors
127096522
Complex B
127096522
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127096522
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
90S particles
Helicases
127096522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
Motif
Other DBs
NCBI-GeneID:
127096522
NCBI-ProteinID:
XP_050891040
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All DBs
Position
6:complement(516938034..516940193)
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AA seq
585 aa
AA seq
DB search
MENSKVANILNRWSGRPYSVEILEKRKKLAIWQHRDQFLNAFRANQVLALVAQTGSGKST
QVISLYFLALHIMKVPGRLHPVEIVYTSDEEVDRNNYLDAVTKTVVNIHRHEPPGDVLVF
LSEEGEVEDACNKISKEICNLKNLVGPMKLVPLYSCLPATMQHKIFEPCSGRKIVVTTNI
VESSLSMDGISYVVDSGFVKKNVFDNKLRMESLVTSTISKASANMRSEHASRSTSDGRRG
KCFRLYTEESFNNNFDLETCPEIWRLNLSNMILSFWKPDVYDFLCFGYVDFPDVENLVCA
FEELAYLGAFDRDCKITNIGEVMSVFPLEPRMSKMLVISPEFNCSQEILSISSMLSVPNC
FVGSREEQKEVKVKFHSIHGDHLTFLNIYRAYKQNNEDLSWCNDNFISYWTLKEADNIRQ
ELEYIMMARFKLDLCRIDINNTVNIRKSILGGYFMHVAHLDTTGNYITLEGNKVVTFHQL
SNCLDDNKPEWVIFNEFPATGCDFIHIVTTIPKDWLIDSAAPWSLYYKLSNYPNSEAKST
IVYASYARMLKERKLTDGKLGKHANISTFHRLLPYHNNRKRKERL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattcgaaagttgctaacatattgaatcgatggagtggaagaccttattcagtt
gagattttagaaaagaggaagaagctcgcaatctggcagcacagagatcagtttttgaat
gcttttagggctaaccaagttttggctcttgttgctcaaactggttccggaaaatccaca
caggtaatttctctctattttcttgctcttcatattatgaaagttcctggaaggttacat
cctgtggaaattgtttatacaagtgatgaagaagttgataggaataattacttggatgct
gttacaaagactgtggtgaatatacatagacatgaacctcctggagatgtacttgtgttt
ttgagtgaagagggagaggtagaagatgcatgcaacaaaatatcaaaagaaatatgtaat
ctaaagaatcttgtgggtcctatgaaactggttccactatattcttgtctaccagcaaca
atgcaacacaagatttttgaaccatgttctggaagaaagattgtggtaacaacaaatata
gtagaatcttccttatcaatggatggtatttcgtatgttgttgactcaggatttgttaag
aaaaatgtttttgacaataaactacgtatggagtctctagtaacgtcgacaatatcaaaa
gcaagtgcaaatatgagatcagagcatgctagtagaagtactagtgatggacgaaggggg
aaatgttttcggctttatacagaagaaagtttcaacaataattttgatctagagacatgt
cctgaaatttggagattaaatctttccaacatgattttatctttttggaaacctgatgta
tatgattttttgtgttttggttatgttgactttcctgatgttgagaatctagtgtgcgct
tttgaagaattggcatacttgggtgcatttgatagagattgcaagataacaaatattggt
gaggttatgagtgtgtttcccttggaaccacgaatgtcaaagatgctggttattagtcct
gaattcaattgttcacaagagatactatcaatttcttccatgctctcagtacccaattgc
tttgtcggatcaagagaggaacaaaaagaagtaaaagttaagtttcacagcattcatgga
gatcatctcacattcttgaacatctaccgcgcatacaaacaaaataacgaggatctctct
tggtgcaatgataattttattagttattggacattaaaagaagcagataatattagacaa
gagttggaatatatcatgatggctagattcaaattagatttatgtaggattgacattaac
aatactgtcaacataagaaagtctattcttggtggatatttcatgcacgtagcacattta
gatactactggaaattacatcacattggaaggaaataaggtggtgacttttcatcaatta
tccaattgcttggatgacaacaagccagaatgggtcatttttaatgagtttccggctact
ggttgtgattttattcatatagtaacaacaatacctaaggattggttgatcgactcagca
gctccatggtcactgtactacaaattatcaaattatcctaatagtgaagcaaagagtact
attgtatatgcttcttatgcaagaatgctcaaggaaagaaaacttacggatggaaagctt
ggaaagcatgctaacatcagcactttccatcgcttgttaccttatcacaacaataggaaa
agaaaagaaagactttag
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