Pisum sativum (pea): 127096525
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Entry
127096525 CDS
T08598
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
psat
Pisum sativum (pea)
Pathway
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127096525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psat03041
]
127096525
03009 Ribosome biogenesis [BR:
psat03009
]
127096525
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127096525
Spliceosome [BR:
psat03041
]
Complex A
U2 snRNP components
U2 related factors
127096525
Complex B
127096525
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127096525
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
90S particles
Helicases
127096525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
Sortase
AAA_22
AAA_16
Glyco_tran_WecG
TP_methylase
Motif
Other DBs
NCBI-GeneID:
127096525
NCBI-ProteinID:
XP_050891043
LinkDB
All DBs
Position
6:complement(517125618..517134349)
Genome browser
AA seq
450 aa
AA seq
DB search
MENPKESHLLAAKRNLRKSTSGYVFMLGFRAISWTSKKQEIITLSTIEAEYIVATTCVCQ
AIWIRRILEGLNFVQERKVDATVIYCDNSSTIKLSNNLVLHGRSKHKDLKFHFIQNLTKD
EVIELHYCKIEDQVADIRINPLKVAAFQKLRALLGLSLDETFMVLLLGEWRKESGEEGGS
RRKEEEARNLAAQRSVVIIIDDIQERTLATDLLLGYLSTLLTKRADLKLIFMSSTSLESE
KFKEHFQEHYPSIHIMKVPGRLHPVEIVYTSDEEVDRNNYLDAVTKTVVNIHRHEPPGDV
LVFLSEEGEVEDACNKISKEICNLKNLVGPMKLVPLYSCLPATMQHKIFEPCSGRKIVVT
TNIVESSLSMDDISYVVDSGFVKKKVFDNKLNMECLVTSTISKASADMRSEHAGRTISGK
CFRVYTEESYKNNRDQEICPEILRLRVCLI
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcctaaggagagtcatctcttggcagcaaagagaaatcttagaaagagtact
tctggctatgtctttatgttgggttttagagccatctcatggacatcaaagaaacaagag
ataattactctatcaactatcgaagcagaatatattgttgcaacaacatgtgtttgtcaa
gcaatttggattaggaggattcttgaagggctgaattttgtgcaagaaaggaaagttgat
gctactgtaatttactgtgacaacagttcaactatcaaactgtccaataatcttgtttta
catggaagaagcaaacacaaagacttgaaatttcattttatccagaatctcacaaaggat
gaggtgattgaacttcactactgcaaaattgaagaccaagttgctgatataaggataaat
ccattgaaggtggctgcatttcagaagcttagagcattgttgggtttaagtttggatgaa
acttttatggtgttgttgttgggtgaatggagaaaagagagtggagaggaaggtggtagt
aggagaaaagaggaagaagctcgcaatctggcagcacagagatcagttgttataattatc
gacgatatacaggaaagaactttggctactgatttgctacttggatatttatccacactt
cttacaaaaagagcagatttgaagttgatattcatgagtagtacaagtcttgaatctgaa
aagttcaaggaacatttccaagaacattatcctagtattcatattatgaaagttcctgga
aggttacatcctgtggaaattgtttatacaagtgatgaagaagttgataggaataattac
ttggatgctgttacaaagactgtggtgaatatacatagacatgaacctcctggagatgta
cttgtgtttttgagtgaagagggagaggtagaagatgcatgcaacaaaatatcaaaagaa
atatgtaatctaaagaatcttgtgggtcctatgaaactggttccactatattcttgtcta
ccagcaacaatgcaacacaagatttttgaaccatgttctggaagaaagattgtggtaaca
acaaatatagtagaatcttccttatcaatggatgatatttcgtatgttgttgactctgga
tttgttaagaaaaaggtttttgacaataaactaaatatggagtgtctagtaacgtcaaca
atatcaaaagcaagtgcagatatgaggtcagagcatgctggtagaacaataagcgggaaa
tgttttagagtttatacagaagaaagttacaagaataatcgtgatcaagagatatgtcct
gaaattctgagattaagggtgtgtttgatttag
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