Pisum sativum (pea): 127096719
Help
Entry
127096719 CDS
T08598
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
psat
Pisum sativum (pea)
Pathway
psat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127096719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127096719
03012 Translation factors [BR:
psat03012
]
127096719
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127096719
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127096719
Translation factors [BR:
psat03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127096719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
T2SSE
AAA_19
Rad17
Motif
Other DBs
NCBI-GeneID:
127096719
NCBI-ProteinID:
XP_050891226
LinkDB
All DBs
Position
6:complement(155476125..155489197)
Genome browser
AA seq
1029 aa
AA seq
DB search
MLHCLFRPSFHSHHLFSIQLPAPKHFLSNTRISTSVMSYRPNYQGGGRRGGASSSGRGGG
RRGGGGGGGRGGGRGEQRWWDPVWRAERLRQQQAEKEVLDEKEWWDKIEKMKKGGEQEMV
IKRYFSIADQQALADMAYQHELYFHAYSKGKILVVSKVPLPDYRADLDERHGSTQKEIKM
STDIERRVGNLLNMSQSTGASAASLASVSTDMEHKISSTIKSASHQTDTSKEKLSVVLKE
RQELEQTRDSVKEMKSFREKLPAFKMKSEFLKVVQENQVLVVSGETGCGKTTQLPQFILE
EEISRLRGADCNIICTQPRRVSAISVAARISAERGETLGKTVGYHIRLEAKRSAETHLLF
CTTGVLLRQLVQDPELTGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLILMSATI
NADLFSKYFANAPTMHIPGFTFPVAEHFLEDVLEKTRYSIKSEFDSFEGNTRRKRKQQDS
KKDPLTEMFEDLDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEATIEYICRNEGGGAILV
FLTGWDEISKLLDKLEGNNLLGNRSKFLILPIHGSMPTIDQCEIFDRPPPNKRKIVLATN
IAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASARQRRGRAGRVQPGVCY
RLYPKLIHDAMPEYQLPEILRTPLQELCLHIKSLQLGTVASFLGKALQPPDSLAVQNAIE
LLKTIGALDDKEELTPLGQHLCTVPLDPNIGKMLLMGSIFQCLSPALTIAAALAYRNPFV
LPINRKEEADAAKRYFSGDSCSDHIALLKAFEGWKEAKSRGTEKEFCWENFLSPVTLRLI
DDMRTQFLNLLSDIGFVDKSRGVHAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTAF
YTKEVGKVDIHPSSVNAGIHLFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNLDP
SKNGEGIEMLGGYLHFSASKSVIELIKKLRGQLDKLLNRKIEEPGFDISGEGNVVVAAAV
ELLHNQNMR
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactgcctctttcgcccttcttttcattcccatcacctcttttccatacaactg
cccgcacccaagcatttcctctctaacactcgaatctccacttccgtcatgtcctaccgc
cctaactaccaaggcggaggccgcagaggcggtgcttcatcctccggtcgcggtggaggc
cgacgtggaggcggcggcggtgggggccgtggtggtggacgcggcgagcaaagatggtgg
gaccctgtttggcgtgccgaacgccttagacaacaacaagcagagaaggaggtgcttgat
gagaaagaatggtgggataagatagagaagatgaaaaaaggaggggaacaagagatggtt
ataaagcgttacttcagtattgcagaccagcaagccctagctgatatggcttatcaacat
gagctttatttccatgcatatagtaagggaaagattcttgttgttagcaaagttcctttg
cctgattaccgtgcagaccttgatgagcgtcatgggtcaacacagaaggagattaaaatg
tccacagacatagagaggagagtaggaaatcttttaaatatgtcacagtcaaccggggca
tcagctgctagtctggcttctgtatcaactgatatggaacataaaatatcatcgactata
aaatctgcttcacatcagactgatacttcaaaggagaaactcagtgttgtactcaaggaa
aggcaggaactggagcagacacgtgatagtgtgaaggaaatgaaatcatttagggagaag
cttcctgcatttaaaatgaagtctgagtttctgaaagtcgttcaagaaaatcaggtattg
gtagtttcaggagagacaggctgtggcaaaacaacacagctgccacaattcattttggaa
gaagaaatatcacgcttgcgtggagctgactgcaatataatttgtactcagcctcgtcgt
gtatctgcaatttctgttgcagctcgtatatctgctgaaagaggggaaactcttggtaaa
actgttgggtaccacattcgtcttgaagcaaaacgttctgcggaaacacaccttcttttc
tgcaccactggtgtattacttcggcaactggtccaagatccagagttgactggtgttagt
catttgctggtggatgaaattcatgaaagaggcatgaatgaagacttcttaattataatt
ttacgtgaccttcttccccgtcgtccagatctgcgtctcattctaatgagtgctacaatc
aatgccgatttgttctctaaatattttgcaaatgccccaacaatgcacataccgggattt
actttccctgtagcagagcacttcctagaagatgtgttggagaaaactagatatagcatc
aagtcggagtttgacagttttgaggggaatacaaggagaaaaaggaaacaacaagattct
aagaaggatcctctgactgaaatgtttgaggaccttgatgtggatactcattacaaaaat
tatagcttgggtgttagaaaatcccttgaagcttggtcaggttcacaaattgatttgggt
ctggtagaagcaacaattgaatatatatgtcggaatgaaggtggtggagctattcttgta
tttcttactggctgggatgaaatctctaagctacttgacaaacttgaaggaaataactta
cttggaaaccgtagcaagttcttaatccttccaatacacggttcaatgcctaccattgac
caatgtgaaatatttgatcgtcctccccctaacaaaagaaaaattgtgctagcaacaaat
attgctgagagcagcatcaccatagatgatgttgtatatgtcatagactgcggtaaagca
aaggaaaccagctatgacgccctaaataagcttgcctgcttgttgccatcatggatttca
aaggcctcggcacgtcagagacgtggacgtgctggtcgagtacaacctggagtttgttat
agattgtatccaaaactgatccacgatgctatgccagagtatcagttacctgaaatcctt
cgaacgcctttgcaagagttgtgcctgcacattaaaagcttgcagctgggaactgtggca
tcatttttaggaaaggcacttcagccgccagattctcttgctgttcaaaatgctatagaa
cttctgaagacaatcggggcattagatgacaaggaggagcttactccactgggtcagcat
ctttgtactgtacctttggacccaaatatagggaagatgcttctcatgggctctatcttt
cagtgccttagtcctgccctaactattgctgctgctcttgcttaccgtaacccatttgtc
ctacctataaacagaaaagaggaagctgatgcagcaaaacgatatttttctggtgactct
tgcagtgatcatatagcccttcttaaagcttttgagggatggaaggaggcaaaaagtagg
gggactgaaaaggaattttgttgggaaaatttcctatccccggtgaccttgcggttgatt
gatgatatgagaacacaatttctcaacttattatctgacattggatttgttgacaaatcg
aggggtgtccatgcttacaaccagtacagtcatgatttggagatggtttgtgcaattctt
tgtgctggtctctaccctaatgttgtgcagtgcaaaagaagaggaaaacggacagcattc
tacactaaagaagtcgggaaggttgacatccatccctcttctgtaaatgctgggattcat
ctcttccctctgccttacttggtatatagtgaaaaagttaaaacaaccagcatctatatt
agagactctaccaacatttcagattatgcactacttctgtttggtggtaatctcgaccct
agcaaaaatggtgagggcattgagatgcttggaggttaccttcatttctctgcttccaag
agtgtcattgagttgataaagaaattacgtgggcagcttgacaagcttctaaacagaaaa
attgaagaaccagggtttgacatttctggtgaaggaaacgttgtggttgctgctgctgtt
gaattgcttcacaatcaaaatatgcgatag
DBGET
integrated database retrieval system
