Pisum sativum (pea): 127097156
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Entry
127097156 CDS
T08598
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
psat
Pisum sativum (pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psat03021
]
127097156
Transcription machinery [BR:
psat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
127097156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
127097156
NCBI-ProteinID:
XP_050891623
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Position
6:37399315..37402270
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AA seq
564 aa
AA seq
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MGLSFGFRLNPKLRYTLPIHSPHFFTNSSIFLSSSSSGFLNFGLKCDVVGGREALFNPVR
LSLLSTIYEESETLHKDFGKTFAFSSSALEAPEKDFLLGGDVTTKVNKGKRSLSSVREMI
DNTKLPHGESHFGMLMENLDVLEETFADSEALRLKKNIISQIEKLGALELFNDCLTTSSG
TSRVSNCTNEVLEQVEENKRNCKVDDYTGKVIVHSSKRKESRTRRKRISVSIAPSSKSLP
LEDNNQESTLRSSPASFVKKVSYTKNRRMAIAQREVEMSKGVKVLAELEKMKTALEEDTK
QVVSLSSWAEASGVEEKMLQQQLYHGYYCRDELIRSTRSLVVYFAKKYRGMGIALEDLLQ
VGYIGVLQGAERFDTTRGYRFSTYVQYWIRKSMSRVVAKYARGITVPWSMNKAISQIQKA
RKVLKNTTMKYADDHEIANMTGLSLDKIRSASHCLRIVSSMNRNQDIDYLGQMADKSIEC
PEETVMKQHFRKDIFDILQSLDSRERQILILRFGLNDHQPRSLEYIGRIFKVSKEWIRKI
EQKALTKLRNETNISKLNYYLDLQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctcttttggttttagattaaacccaaaactcagatatactcttccaattcac
tctcctcatttcttcaccaattcatccatcttcctctcgtcttcatcttctggttttttg
aattttgggttaaaatgtgatgtagttggaggcagggaagctttattcaaccctgtgagg
ttatctttgctttcaacaatttatgaggaatcagaaactttgcacaaggattttggaaag
acgtttgcgttttcttcatcagcattggaagctccagagaaagattttttgcttggagga
gatgtgacaacaaaggtaaataaaggaaagaggtcgcttagtagcgtgcgtgaaatgatc
gataacacgaaactgcctcatggggaatcgcatttcggtatgttaatggagaatcttgat
gttttagaagaaacttttgctgattctgaagcattgaggttgaagaagaatattatatcg
caaatagaaaagcttggagctcttgagttgttcaatgattgtctaacaacatcttccgga
acctcgcgcgtatcgaattgcactaacgaagttcttgaacaagttgaagagaataagaga
aactgcaaagttgatgactatacaggtaaagttattgtccattctagcaagaggaaggaa
agtagaacaagaagaaagcgaatatctgtttccattgcaccttcgtctaagtcgttgccg
ttagaagataataatcaagaaagtacattacgttcttcgccggcttcttttgtaaaaaaa
gtatcatatactaaaaatagaagaatggcgattgctcaaagggaagttgaaatgtcaaaa
ggagtaaaggttttagcagagttagagaaaatgaaaacagccttagaagaggatacaaag
caagtggtaagcttgagtagctgggcggaagcatccggagtcgaggagaagatgctacaa
cagcaactgtatcatggctattattgtagagacgagttgatacggagtactcgttcgtta
gttgtatactttgccaaaaaataccggggtatgggaatagctttggaagatttacttcag
gtagggtatataggtgttctccaaggagccgagcgattcgacactacaagaggataccga
ttctcaacctatgtgcaatactggataaggaaatcaatgtcaagagtggtggcaaaatat
gctcggggaatcaccgttccttggtcaatgaacaaggcgataagtcagatccagaaagca
cgaaaagtcttgaaaaacacgaccatgaaatacgcagacgatcacgagattgcaaatatg
acaggtctttctctggataaaatcagatcagctagccattgtctgagaatagtttcctca
atgaatcggaatcaagatatagattatttgggtcaaatggccgataagtcgatagagtgt
ccagaagagaccgtcatgaaacaacactttagaaaagacatatttgatatccttcaaagc
ttggactcgagggaaagacaaatactaatcctacgattcggccttaacgatcaccaaccc
aggtccctcgagtatatagggaggattttcaaagttagcaaagagtggataaggaaaata
gagcaaaaagctctcacaaaactaaggaatgaaacaaacatttcaaagttgaattactat
ttggatctgcagtag
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