Pisum sativum (pea): 127098281
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Entry
127098281 CDS
T08598
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
psat
Pisum sativum (pea)
Pathway
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127098281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psat03041
]
127098281
Spliceosome [BR:
psat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127098281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_WDR75_1st
PRP4
Beta-prop_EIPR1
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_Vps41
eIF2A
WD40_like
Motif
Other DBs
NCBI-GeneID:
127098281
NCBI-ProteinID:
XP_050892784
LinkDB
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Position
6:4770559..4774583
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AA seq
574 aa
AA seq
DB search
MEVEMENSTSNVTGESSIPGSDVQEQNPVSSAQPTLPQPTQPVIPPVITPVVPPLAPIPV
VPSSLVRPLAPLPVRPPVIKPPVPQNGDAGSSDSESDGDDADTRINKGTGEYEISEESRL
VRERQEKAMQDLMMRRRAAALAVPTNDMAVRARLRHLGEPITLFGEREMERRDRLRMIMA
KLDADGQLEKLTKALEDEEAATFAPKDEAEDDVQYPFYTEGSKSLLDARIDIAKYSLVRA
ALRIQRTQRRRDDPDEDVDAEMDWTLKQAANLNLEFSEIGDDRPLTGCSFSRDGKGLATC
SLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPVHNHLATASADRTAKYWNDQGSLLRT
FEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRSVYGLAFHHDGS
LAASCGLDALARVWDLRTGRSVLALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRK
KKSLYTIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSL
DVLGDGGYIVTVSHDRTIKLWSSGTASEQAMDVD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggagatggaaaattcaacatcgaatgttactggtgaatcatctatacctggc
tctgatgttcaggaacaaaaccctgtatcttctgctcaaccaactttgccccagccaact
caacctgttattccaccagttattactcctgtcgtgcctcctctggctccaattcctgtg
gttccttcctctcttgtccggccgctggcaccactcccagtccggccaccggttattaag
ccaccagtgccacaaaatggagacgctgggtctagtgattctgagtcagatggtgatgat
gcagacaccagaattaataagggcacaggcgagtatgagatatcagaagagagtagactg
gtgagggagcgacaggaaaaagcgatgcaagacctcatgatgagaagacgtgctgctgct
cttgctgttcccacgaatgacatggcagtgagggcccgtcttcgccatcttggtgagccg
attactctctttggcgagagggagatggagagacgggacaggttgcggatgattatggca
aagctggatgccgatggtcagctggaaaagctaacgaaagctcttgaggatgaagaggcc
gcaacttttgctccaaaagatgaggctgaggatgatgtgcagtatcctttttacactgaa
gggtcaaagtctctcctcgatgcaaggattgatattgctaaatattctttagtaagggct
gcattgcgtattcaacgtacccagagaagaagagatgatccggatgaagatgtggacgcg
gagatggattggacattaaagcaggctgcgaatttgaatcttgaattcagtgaaatcgga
gatgatcggccacttactggttgctcgttctcccgggatggaaaagggcttgctacttgt
tctctaactggagcttccaagttatggagcatgcctaatgtaaaaaaagtttctaccttc
aaggggcacaccgagcgtgctactgatgttgcttattctcctgtgcacaatcatttagct
actgcatctgccgaccggacagcaaagtattggaatgatcaaggatctcttttgagaaca
tttgagggtcatcttgaccgtcttgcacgcattgccttccatccatcagggaagtacttg
ggcactgctagctttgacaagacatggagattatgggacgttgaaacaggagaggagttg
cttcttcaagaaggccatagtagaagtgtatatggtttagcttttcatcacgatggatcg
ttagccgcgtcttgtggactagatgctctggctcgtgtatgggacctccgaactgggaga
agtgttcttgcactagaaggtcatgtcaaaccggttcttggcatcagtttttctcctaat
ggatatcatttagccactggtggtgaagataacacttgtcgcatttgggacttgaggaag
aagaaatccttgtacaccattcctgctcactctaatttaatatcgcaagtaaagtttgag
ccacaagagggttactttttggtaactgcatcatatgacatgacagctaaggtttggtcg
ggccgggactttaagcctgtgaagacactatcagggcatgaagcaaaagttacttctctg
gatgtccttggagatggtgggtatatagttactgtctcccatgatcgcaccataaagctg
tggtccagtggcactgctagtgagcaagctatggatgttgactaa
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