Lathyrus oleraceus (garden pea): 127098675
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Entry
127098675 CDS
T08598
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
psat
Lathyrus oleraceus (garden pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psat03009
]
127098675
03036 Chromosome and associated proteins [BR:
psat03036
]
127098675
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127098675
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
Pre-60S particles
Helicases
127098675
Chromosome and associated proteins [BR:
psat03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
127098675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
CMS1
FlpD
ResIII
Motif
Other DBs
NCBI-GeneID:
127098675
NCBI-ProteinID:
XP_050893289
LinkDB
All DBs
Position
6:complement(440474101..440478902)
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AA seq
542 aa
AA seq
DB search
MVLIWLVELALGKTLAFVLPIIESITNGPAKASRKTGDGRPPSVLVLLPTRELACQVNAD
FEVYGAAMGLTSCCLYGGASYQAQEIKLKKGVDIVIGTPGRVKDHIERGKIDLSQLKFRV
LDEADEMLRMGFFEDVELILGKVKNVGKVQTLLFSATLPDWVKHIAKKFLKPDKETADLV
GDTKMKASTSVRHIILPCTGSARSQLIPDIILFYSSGGRTIIFTETKESASQLAELLPGA
KALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHR
SGRTGRAGNTGVSVMLYDPRRSNISKIERESGVKFEHVSAPQANDIAKAIGAEAAEMITQ
VSDSVIPAFKSAAEDLLNNSGLSVVDLLAKALAKAVGYTEIKKRSLLTSMENYVTLLLDT
GRPIFTPTFAYKMLRRFLPEEKVEAVKSLTITADGNGVVFDVLAEDLDTYLAGKKNASDI
SLEVLNALPRLQQRDQSRGGRFGDGNGRGGRIGGGGRNGRFSSDRFANGGGRGRGNWGGK
RW
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggttttgatttggttggtagagctcgcactgggtaaaactcttgcctttgtattgcca
ataatagaatctataacaaacggtcctgcaaaagcatcaagaaagactggcgatgggagg
ccaccgagtgttcttgtgcttttacctactagggaattggcctgtcaggtgaatgctgat
tttgaagtttatggcgcggcaatgggattgacttcttgttgtttatatggaggagcttct
tatcaagctcaagagattaagcttaagaaaggagtcgatattgtcattggtacaccgggc
cgcgtaaaggatcatatagagcgggggaagattgacctgagccagctaaagtttcgtgtc
ctcgatgaagcagatgagatgctgaggatgggtttttttgaagatgttgaactgatcctt
ggtaaggttaaaaatgtaggtaaagttcagacgcttcttttcagcgcgactttgccagac
tgggttaagcatattgctaaaaaatttcttaagccagataaggaaactgcagatcttgtt
ggcgatacgaaaatgaaggccagtaccagtgttaggcatattattcttccttgtactggc
tctgccaggtcccagcttatcccagacattattctcttttacagcagtggaggtcgaaca
attatattcacggagacaaaggagtcggcttctcagctcgcagagttgttgcctggagca
aaagcactccacggcgacatacagcaagcacagcgtgaggttactttgtctggctttagg
tctgggaaattcatgacattagttgcgactaacgtggctgcgcggggtttggatattaat
gatgttcagttaattattcagtgtgaacctccaagggatgttgaagcctatatccatcgt
tccgggcgcacgggaagagcaggtaacactggagtttctgtaatgctatatgatccaagg
aggtcgaatatatctaaaatagagagagagtcgggtgttaaattcgaacatgtatctgcc
cctcaggctaatgatattgccaaagctattggtgcagaagctgcagaaatgataactcaa
gtgtctgatagtgtgattcctgcgttcaagtctgctgccgaggatcttttaaataactct
ggtttatccgtcgttgatttacttgcaaaggctcttgcgaaggctgttggttatacagag
atcaagaaaagatctctattaacttctatggagaactatgttacattacttcttgatacc
gggagacctatctttaccccaacttttgcatacaaaatgttgaggaggtttttgccggaa
gagaaggttgaggctgtgaaaagtcttactataactgcagatggaaatggtgttgttttt
gatgtattagctgaagatttagatacatatcttgctggtaagaaaaacgcctcagatata
agtttagaggtgttaaacgctttgccacgtctgcaacagagagatcaatcaagaggtggc
agatttggagatggcaatggtcgtggtgggagaattggtggtggcggaaggaatggtaga
ttttcaagtgataggtttgcgaacggtggtggtagaggtcgtggtaactggggtgggaaa
agatggtga
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