Lathyrus oleraceus (garden pea): 127100601
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Entry
127100601 CDS
T08598
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03082
ATP-dependent chromatin remodeling
psat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127100601
03083 Polycomb repressive complex
127100601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psat03036
]
127100601
Chromosome and associated proteins [BR:
psat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
127100601
Histone modification proteins
HAT complexes
HATB complex
127100601
HDAC complexes
Sin3A-HDAC complex
127100601
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
127100601
PRC2.2
127100601
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
127100601
Heterochromatin formation proteins
Other heterochromatin formation proteins
127100601
Chromatin remodeling factors
NuRD complex
127100601
NuRF complex
127100601
NuRF complex (fruit fly)
127100601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_TEP1_C
MIOS_WD40
ANAPC4_WD40
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
127100601
NCBI-ProteinID:
XP_050893791
LinkDB
All DBs
Position
7:156418566..156422222
Genome browser
AA seq
425 aa
AA seq
DB search
MWMGKEDEEMRGEIEERLINEEYKIWKKNSPFLYDLVITHALEWPSLTVEWLPDRQEPPG
KDYSLQKLILGTHTSENEPNYLMLAQVQLPLDDSENDARHYEDDRPEVGGFGCANGKVQI
IQQINHDGEVNRARYMPQNNFIIATKTISAEVYVFDYSKHPSKPPLDGSCNPDLRLRGHN
TEGYGLSWSTFKQGHLLSGSDDAQICLWDINGTPKNKSLDAMQIFKVHEGVVEDVAWHLR
HEYLFGSVGDDQYLLIWDLRTPSVTKPVQSCIAHSSEVNCLAFNPFNEWVVATGSTDKTV
KLWDLRKIISPLHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQSAED
AEDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDMPEQ
SVKAP
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgggtaaagaagacgaagaaatgagaggtgaaatcgaagaacgattaatcaac
gaagaatacaaaatctggaagaaaaacagtccctttctctacgatctcgtcatcacccac
gccctagaatggccttccctcaccgtcgaatggctcccggaccgccaagagccaccggga
aaagattactcccttcaaaaactcatcttgggaacccacacttccgaaaacgagcccaat
tacctcatgttagcgcaagttcaactccctctcgatgattccgaaaacgacgctcgtcat
tacgaggatgaccgtcctgaagtcggtgggttcggttgtgctaacggtaaggttcagatt
attcaacagattaatcatgatggtgaggtgaatagggctcggtatatgccgcagaataat
tttattattgctactaaaactattagtgctgaggtttatgtttttgattatagtaaacat
ccttctaaacctcctcttgatggttcttgtaaccctgatttgaggttgagagggcataat
actgaagggtatggtttgtcttggagtacttttaaacaagggcatttgcttagtggctct
gatgatgctcagatttgtttgtgggatattaatggtactcccaagaataagtctcttgat
gccatgcagatttttaaggtacatgaaggtgttgttgaggatgtggcttggcatttgagg
catgagtatttgtttggttctgttggggatgatcagtatttgcttatatgggatcttcga
acaccctctgttaccaagcctgtccagtcttgcattgctcattcaagcgaggttaactgt
ctggcgttcaatcccttcaatgaatgggtggttgctaccggttctactgataaaacagtg
aaattgtgggatctgcgaaagatcatcagtcctcttcacacctttgatagtcataaggaa
gaggttttccaggtcggctggaatccaaagaatgagactatcttggcttcttgttgtctt
ggtagaagactcatggtttgggatctcagcaggattgatgaagaacagtcagcagaagat
gccgaagatggtccaccagaattgctctttattcacggtggtcatacgagcaagatatct
gacttctcttggaacccatgtgaagattgggttgttgctagtgtggctgaagacaatata
cttcaaatatggcagatggccgagaacatttaccatgacgaagacgatatgccagaacag
tcagtgaaggccccttaa
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