Pisum sativum (pea): 127100632
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Entry
127100632 CDS
T08598
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
psat
Pisum sativum (pea)
Pathway
psat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127100632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127100632
03012 Translation factors [BR:
psat03012
]
127100632
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127100632
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127100632
Translation factors [BR:
psat03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127100632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
AAA_22
T2SSE
nSTAND3
AAA_19
Dicer_dimer
AAA_16
ATPase
Myosin_head
Motif
Other DBs
NCBI-GeneID:
127100632
NCBI-ProteinID:
XP_050893833
LinkDB
All DBs
Position
7:12781413..12797552
Genome browser
AA seq
1173 aa
AA seq
DB search
MPLPMRIRVPVLPYSGIFRTATRHILIATSLTPTTTNLRIRLSTSLTAIHHRYGAPLRYR
TSALPLFHQQSSTYGRFAFHDVSSDESDLEFAPPHSQPRPQQQLGDSALENIDSWRWKLT
MLLRNKDEQEVVSNEKKDRRDFLQLETLATRMGLYSRQYAKVVVFSKVPLPNYRPDLDDK
RPLREVTLPFGVHREVDTHLLAHLSHKATKRVGSLDLHQSRNGGSIPADEGVYGHPEPMS
HNSVAKEKFLQRKSLQLRHQQQNWQESPEGQKMLEFRRSLPAFKEKDAFLKAVSENQVIV
VSGETGCGKTTQLPQYILESEIEAARGALCSIICTQPRRISAISVSERVAAEHGEKLGES
VGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVSHVIVDEIHERGMNEDFLLIVL
KDLLPRRPDLRLILMSATLNAELFSSYFDGAPTMHIPGFTFPVRAQFLEDILERTGYRLT
PYNQIDDYGQEKSWKMQKQAQSFKKRKSQIVSAVEDALEVAGFNGYSLRTKESMSCWNPD
SIGFNLIEHVLCHIVKNERPGAVLVFMTGWDDINSLKDQLHAHPLLGDQSRVLLLACHGS
MSSSEQKLIFENPEGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLL
PSWISKAAARQRKGRAGRVQSGECYHLYPRCVYDAFSDYQLPELLRTPLQSLCLQIKSLQ
LGSISEFLSSALQPPEALSVQNAVEYLKIIGALDENENLTVLGRKLSMLPVEPKLGKMLI
LGAIFNCLDPILTVVAGLSVRDPFVVPADKKDLAESAKAHFAARAYSDHLALIRAYDGWK
DAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFFHLLKDIGLVGNISETNNKWSNEVHLLR
AVICAGLFPGISSVVNKEKSIALKTMEDGPVLLYANSVNGSVPKIPYPWLVFNEKIKVNT
VFLRDSTGVSDSMLLLFGGNISKGGLDGHLKMLGGYLEFFMKPELAKTYSTLKKELEELI
QKKLLDPMLDIQSHNELLSAVRLLVSEDNCDGRFVYGHQVLQQLKKATKSKSGDGVKGDN
SKNQLQTFLSRAGHQPPTYKTQQLRNTQFRSTVIFNGLDFVGQPCSSKKLAEKSAATEAI
IWLKGDNTHTYGDMGHASVLLKKSNKKSRKKIV
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccactaccgatgcgaattcgagtccccgtgctaccatactccggcatcttcagaacc
gccactcgtcacatcctaatcgccacttccctaacaccaacaaccacaaacctccgcatt
cgtctttcaacttccttaaccgccatccaccacagatatggcgcgcctctcagataccga
acctctgctcttccgctttttcaccagcaaagttccacttacggccgtttcgcctttcac
gacgtctccagcgacgagtccgacctcgaattcgcgcctcctcactctcaaccccgccct
caacaacagttgggtgattcggcacttgaaaacattgactcttggagatggaaactcacc
atgcttcttcgcaataaagacgagcaagaagttgtgtccaatgagaaaaaggaccgtcgt
gattttctgcaacttgaaactttagctactaggatgggtttatacagtcgacagtatgca
aaagttgtcgtgtttagcaaggtgcctttgccaaattatcgccctgatctcgatgataag
cgtccgttgagagaagtaaccttaccatttggtgttcatagagaagtagacactcatctt
cttgctcatctttcacataaggctacaaaaagagtaggctctttggacttgcatcaatca
aggaatggcggaagcattcctgctgatgaaggggtttatgggcatccagaacccatgagt
cataatagtgttgcgaaagagaaattccttcaacgaaaaagtttgcaactgcgtcatcaa
caacaaaactggcaggaatctcccgaagggcaaaagatgcttgaatttcgccgaagtctt
cctgcattcaaagagaaagatgcatttttgaaagccgtttcagagaatcaggtcattgtt
gtctcgggtgaaactggttgcggtaagactacacaacttcctcaatacatattagaatct
gagattgaagctgcacgtggagctctatgtagcataatttgtactcagcctagaagaata
tctgctatatctgtttctgaaagagttgcagcagaacatggggaaaaattgggagaatct
gttggttataaagttcggttggagggtatgagaggaagggatactcgtcttcttttttgc
accacaggtgtgttattgcggagactacttgtggatagaagtttaaaaggtgtatctcat
gttattgttgatgaaattcatgaacgtggaatgaatgaagattttcttctcattgtcctg
aaggatctcctccctcgtcgtcctgatttgagattaattttgatgagtgcaaccttaaat
gctgagcttttttcttcgtattttgatggcgccccaactatgcatatccctggatttact
tttccagttcgagcacaatttcttgaggatattctggaaaggactggatatcgtttgact
ccttataatcaaattgatgactatgggcaagagaaatcatggaaaatgcagaagcaagct
caatctttcaaaaaaagaaagagccagattgtttctgctgttgaggatgcattagaagtt
gcgggctttaacgggtatagcctacgcactaaggagtcaatgtcctgctggaaccctgac
tcaattggttttaaccttattgaacacgtgctttgccacattgttaagaatgaaaggcca
ggtgctgttttggtttttatgactggttgggatgatataaactctttgaaggatcaactc
catgctcatccgttgttgggtgatcagagccgtgtattacttcttgcatgccatggctct
atgtccagctcagaacagaaattaatatttgaaaatcctgaaggaggggtgaggaaaatt
gttctggctactaatatggcagagactagtattaccatcaatgacgttgtttttgtggtt
gattgtggaaaagcaaaagagacatcatatgacgcattgaataacactccttgtttgctt
ccatcctggatctcaaaagctgctgcccgacagagaaaaggaagggctggtcgtgttcaa
tctggcgaatgctatcatctttatcccagatgtgtttatgatgctttttctgattatcaa
ctgccagagcttttaagaacacctttacagtccttatgtctacaaataaaaagtctacaa
cttggaagcatctctgagtttttgtctagtgctctccagccaccagaggctctttcggtt
caaaatgctgttgaatatttgaagattatcggcgccttagatgagaatgaaaatcttaca
gttctagggcgcaagttgtcaatgcttcccgtggagcctaagcttggcaagatgctcatc
cttggagctattttcaactgtttggatcccatattgactgttgttgctgggcttagtgtg
agagatccatttgttgtgccggctgacaagaaggatcttgcagagtctgccaaggcccac
tttgctgctcgtgcatacagtgaccatcttgcacttatccgggcttatgatggatggaaa
gatgctgaagcacagcaagctggttacgagtactgttggcgtaattttctttcttctcaa
acacttagggctattgactctcttcgaaagcaattctttcacttgctcaaagatattggt
ctggttggcaacatttctgaaaccaacaataaatggagtaatgaggtgcatctgctccga
gcagttatctgtgcgggtttgtttccgggaatatcctctgttgtgaacaaggaaaagtca
atagcactgaaaacaatggaggatggtccggttcttctgtacgctaactctgtaaatgga
agtgtacccaaaattccatacccatggttagtgtttaatgaaaagattaaagtgaataca
gtattccttagggattcaactggtgtatctgattctatgttactcttatttggcgggaac
atatccaaaggtggactggatggtcacctaaaaatgttgggagggtacctggaatttttc
atgaaaccagaattagccaagacttactcaactttaaagaaggaactggaggaattgata
cagaaaaaacttctggatcctatgttggatatacaatcgcacaatgagcttctttcagct
gtaagattgttggtatcagaggacaactgcgatggcagatttgtctatggtcaccaggtc
ctacaacagttgaagaaggcaacgaaatccaaaagtggtgatggagtcaagggtgataat
tctaaaaatcagcttcaaacattccttagcagggctggacatcagccaccaacttacaaa
acacagcaactgagaaacacccaatttcgttctactgtcatattcaatggcttggatttt
gttggccagccatgcagcagcaagaaactagcagaaaaatctgctgctactgaggctatt
atatggttaaaaggggataatacccatacatatggtgatatgggtcatgcatctgtgcta
ttgaagaaaagcaacaagaaaagtaggaaaaaaatcgtttag
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integrated database retrieval system
