Lathyrus oleraceus (garden pea): 127101121
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Entry
127101121 CDS
T08598
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
psat
Lathyrus oleraceus (garden pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psat03009
]
127101121
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127101121
Ribosome biogenesis [BR:
psat03009
]
Eukaryotic type
90S particles
Helicases
127101121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
nSTAND3
ATPase
AAA_19
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
127101121
NCBI-ProteinID:
XP_050894410
LinkDB
All DBs
Position
7:523069833..523076711
Genome browser
AA seq
1404 aa
AA seq
DB search
MTEVLELRQTIARLHRHLHCFSGPPPLKPPPPSTVPRLSDSLSDSLSDRRHSALASKDIK
METLENLGNHAEFNSQSSGGGDNNAQILPTKKTKKRKDGGDDSNVLILPSKKKKKKGMEQ
ERGKVHSSKKQRLSKTQKRKLKKSEDDKGKQLLMEKAIKTLNNNMLPEYAFPLLQSSCNI
NREETVKEKRRRAVHLLKEGLEIPHDNNLSKKQDFPCITEPESEDEENHLVQESKENDFI
QPFRTEGEILYTTSAPLESSQEPVHGNEVVNYESDISTDKQPDEIRSSSPISRSITEIKS
TKSKDKTDENPAANFSELSNLPIVSQRLLTTPTVVHVYRPSEVEEKRKDLPIVMMEQEIM
EAINYNSSVIICGETGCGKTTQVPQFLYEAGYGSSKFHARSGVIGVTQPRRVAVLATARR
VAYELGVRLGKEVGFQVRYDKRIGENCSIKFMTDGILLREVQNDILLRRYSVLILDEAHE
RSLNTDILIGMLSRVIRTRQKIYNDQQKMILSGESISPEKMVFPLKLVLMSATLRVQDFT
SGKLFYTPPPVIEVPTRQFPVTKYFAKKTEITDYIGAAYKKILAIHKRLPSGGILVFVTG
QREVEDLCRKLRKASKEFIMKKVKGPVENDGTVVHETSSIEGININEINEAFEVSGSSSI
QQTDRFSSYDEDDNNFDANESDSYDSETESELEFNDDDDNNHKDSENNSNIVDVLGKEGS
LASLKAAFESLSGQASVNTGDGLDASKVCREKITRENQSSSPGALFVLPLYAMLPAAAQL
RVFEEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKSYNSSNGMETYEVKWISKA
SADQRAGRAGRTAAGHSYRLYSSAAFNNEFPEFSPAEVEKVPVHGVVLLLKSMNIKKVAN
FPFPTSLKASSLLEAENCLRALEALDCKDELTLLGKAMALYPLSPRHSRMILTVIKNTRH
KHVRSSSLLLAYAAAAAAALSLPNPFVMQYERNDSSEGSEMSKKSSVGDNENNIDKKEKT
KRKKLKETSKAAREKFRIVSSDALAIAYALQCFEYSQNSVQFCEDNALHFKTMDEMSKLR
QQLLKLVFYQSDKGGLEQEYSWTHGTLDDVERVWQVSSVHYPLPLVEERLLCQAICAGWA
DRVAKRIPISYGPTDGETISRVGRYQSCMVDESIFIHRWSSVSTARPEFLVYNELLETKR
PNKEGETSAKRAYMHGVTSVDPTWLVENAKSSCTFSPPLTDPRPFYDAQSDQVKCWVIPT
FGRFCWELPKHSLPINNVELRVQVFAYALLEGQVCPCLKSVRKYMSAPPESILRREAFGQ
KRVGNLLSKLESKLIDSSAKLRTAWKENPRELYSEILDWFQQGFNNHFQKLWLQMLREVL
QETQEQPPNNSFKRKSKGKSKSGQ
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagttttggaactgaggcagaccatagcgcgcctgcaccgccatcttcactgc
ttctccggccctccaccgctgaaacctccgccaccatcaaccgtcccgcgcctctcggac
tcactttcggactcactttcggaccgccgtcactcagcattggcttctaaggacatcaaa
atggaaactttggaaaatctcggaaaccatgccgagttcaattctcaaagttctggaggt
ggtgataataatgcacaaattttgccgactaagaagacgaagaaaaggaaagatggaggt
gatgatagtaatgtactaattttgccaagtaagaagaagaaaaagaaagggatggaacag
gagcgcggcaaagtccattcaagtaagaagcagagattgagcaaaactcagaaaaggaag
ctgaagaagtcagaggatgacaagggtaaacaacttttgatggaaaaagccattaagaca
ttaaataacaacatgcttcctgagtacgcgtttcctcttttgcagtcatcatgcaatatc
aaccgggaggagactgtgaaggaaaagcgcaggagagcagtacatttattaaaagaagga
ttggagattccacatgataataacctgtccaagaaacaggattttccatgtataactgaa
cctgagtcagaagacgaagagaatcatttggtgcaggaatctaaagaaaatgacttcata
caaccttttagaactgaaggagaaatcttgtatacaacatccgctcccctggagtcctct
caagaaccagttcatggaaatgaagttgtaaattatgaatctgacatttccactgacaag
caacctgatgaaatcagaagttcttctcccatttctcgttctattaccgagataaaaagc
acaaagtcaaaggacaagacagatgaaaaccctgccgccaatttcagcgaattgagcaac
cttccaattgtttcacagaggcttttgactactcctactgttgtccatgtatacaggcca
tcagaggttgaagagaaaagaaaggatcttcctatagtaatgatggaacaagagataatg
gaagctataaattacaattccagtgtcatcatatgtggagaaactggatgtggtaaaaca
actcaggttccccagtttctttatgaagctggatatggttcaagcaagttccacgcccgc
agtggtgttattggtgtcactcaaccacgtcgggtggctgttcttgccacagcaaggcgt
gtggcgtatgagcttggtgttcgtctaggaaaggaggttggctttcaagttaggtatgac
aagagaattggagaaaattgctctatcaagtttatgactgatggcattttgctacgagaa
gttcagaatgatattttattgaggcgttattccgtcctaattcttgatgaggctcatgag
aggagcttgaacacagacattctgattgggatgctctcgcgtgtaattagaactcgccaa
aagatttataatgaccagcagaagatgatcctttcgggagaaagtataagtcctgaaaaa
atggtttttccattaaaacttgtgctgatgagtgccaccttgcgtgtacaagactttact
tctggaaaattattctacactcccccacctgtgatagaagttcctacaaggcagtttcca
gttaccaagtattttgcaaaaaaaaccgagataacagattatattggtgcagcgtataag
aagatcctggcaattcacaagaggctgccatctgggggaatacttgtctttgtcactgga
caaagggaagtagaggacttgtgcaggaagctacgcaaagcttcaaaggagtttatcatg
aaaaaagttaaaggacctgtggaaaatgatggcactgtggtccatgaaacaagttctatt
gagggaataaatattaatgagattaatgaagcatttgaggtgtctggaagttcatccatc
cagcaaactgataggtttagtagttatgatgaagatgacaataattttgatgcgaacgaa
tctgattcttatgattcagaaacggagagtgagttggaattcaatgatgatgatgataat
aatcacaaggattcagaaaacaatagtaatattgtggatgtcctgggaaaggaaggaagt
cttgcttcattgaaggctgcttttgaaagcttgtctgggcaagcttcggtgaatactgga
gatggtttagacgcatcaaaagtttgcagggagaaaataactagagaaaaccagagttct
tctccaggtgcactctttgttctaccactttatgctatgctgcctgctgcagctcaactt
cgtgtatttgaagaagttaaggagggagagaggcttgttgttgttgctacaaatgttgca
gaaacatctttaacaattccagggataaagtatgtggttgatactggaagggaaaaggta
aagagttacaactcctctaatggcatggagacatatgaagtgaaatggataagtaaggca
tctgctgatcaacgtgcaggcagagctggaagaactgcagcagggcatagttatcgccta
tattcttctgcagcctttaataatgagtttcctgagttctctcccgctgaagttgagaaa
gtgcctgttcatggtgttgtccttctcttgaaatccatgaatattaagaaggttgcgaat
ttcccgtttcctacttctcttaaggcttcttccctgcttgaagctgagaattgcttgaga
gctcttgaagcacttgactgtaaggatgaacttacacttttgggaaaagccatggcactt
tatcctttgagtcctcgtcattctagaatgatccttactgttataaaaaatacaagacac
aagcatgttcgaagttcaagtctgcttttggcatatgctgctgcagctgctgctgctttg
agtttaccaaatccttttgtaatgcaatatgaaagaaatgatagcagcgaaggttcagaa
atgtccaagaaatctagcgtgggagacaatgagaacaatattgataaaaaagaaaagaca
aagagaaagaaacttaaagaaacctctaaagctgctcgtgaaaaatttcgaattgtcagt
agtgatgccctagccatagcatatgccttgcagtgttttgaatattcacagaattcggta
caattttgtgaagataatgcattgcatttcaaaaccatggatgaaatgtccaaacttaga
cagcagctactcaaactggtcttttatcagagtgataaaggtggtttagaacaagagtat
tcatggactcatggaactctagacgatgtggaacgtgtttggcaagtttcttctgtgcac
tatcctcttcctctggttgaggaaaggctcctttgtcaagcaatatgtgctggctgggca
gatagggttgctaaacgtattccaatttcttatgggcccactgatggagagacgatttct
cgtgttggtaggtatcaatcatgcatggttgatgaaagtattttcattcatcgttggtca
tcagtttctactgcacgccctgagtttctggtttacaatgaactattagagacaaaaaga
ccaaacaaagaaggggagacaagtgcaaagagagcatacatgcatggagtaacgagcgtc
gatccaacttggctagttgagaatgccaagtcttcgtgcaccttctctccacccctgaca
gatcccagaccattttatgatgcgcagtctgaccaagtaaaatgttgggtcatcccaacc
tttgggcgcttctgttgggagcttccaaagcactcattacccattaacaatgttgagctt
cgggtgcaggtgtttgcctatgctttactcgaaggtcaggtgtgtccatgtttgaaatcc
gttcgaaaatacatgtctgcccctcctgaaagtattctgaggagagaagcttttggtcaa
aaaagggtgggaaatctgttgagtaagttagagagcaagttgattgatagctctgccaag
ttaagaacggcgtggaaggagaatccaagagaattatattcagaaattttggattggttt
caacagggttttaacaatcactttcaaaagctatggttacaaatgcttcgcgaagtgctg
caagaaacacaagaacaacctccgaataatagttttaaaagaaagtctaaaggaaaatct
aaatcgggtcaatga
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