Lathyrus oleraceus (garden pea): 127102750
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Entry
127102750 CDS
T08598
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
psat
Lathyrus oleraceus (garden pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psat03000
]
127102750
04121 Ubiquitin system [BR:
psat04121
]
127102750
Transcription factors [BR:
psat03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
127102750
Ubiquitin system [BR:
psat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
127102750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
RNA_bind
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
127102750
NCBI-ProteinID:
XP_050896069
LinkDB
All DBs
Position
1:complement(51523551..51527912)
Genome browser
AA seq
1157 aa
AA seq
DB search
MSLQMRRERREGSRFPSQRPPRQLWVPKGTGGSASTTAETTAETTATTTASNTATTTVAH
PTGLHSREKNSNGDGGSSNQGTVIASPMARHRSNHHVAHRGEREHVAHHVERGHVAHRVE
REHVAHRGERGHVAHRVERGHVAHRVERGSDRGRSGNMVGREYGLRDSSLPQLVQEIQEK
LTRGTVECMICYDMVRRSAPVWSCSSCYSIFHLNCIKKWARAPTSVDLSAEKNLGFNWRC
PGCQFVQHTSSRDIKYVCFCGKRVDPPSDLYLTPHSCGEPCGKPLEKEVFGTEGRKDELC
PHACVLQCHPGPCPPCKAFAPPRLCPCGKKRIATRCSDRQSDLTCGQRCDKLVDCGRHRC
ENACHVGPCDPCQVLINASCFCSKMEQVIFCGEMAMKGEFKPEGGVFSCGSNCGKELSCG
NHICHEACHPGGCGECEFLPSRVKTCCCGKTKLDAERKSCVDPIPTCSQVCGKRLCCGIH
DCPEPCHVGDCPPCKVQISQKCRCGSTSRTVECYKTISENQKFTCEKPCGAKKNCGRHRC
SEKCCPMSGPNIDLTNADWDPHFCSMLCGKKLRCGQHVCETLCHSGHCPPCLETIFTDLT
CACGRTSIPPPLPCGTMPPLCQLPCSVPQPCGHSGSHSCHFGDCPPCSVPVSKECVGGHV
ILRNIPCGSNNIRCNNPCGRTRQCGLHACGRTCHSPPCDVLPGFVEGYRAPCGQTCGAPR
SGCRHMCMAQCHPTFSCPDVRCEFPVTITCSCGRITANVPCDVGGSNSNYNADAVYEASI
IQKLPMPLQPVDANGQKVPLGQRKLMCDDECAKLERKRVLADAFDITPSLDALHFGENSS
FELLSDTFRRDPKWVLAVEERCKILVLGKSKGTTHGLKVHVFCPMIKDKRDAVRLIAERW
KLAVNAAGWEPKRFIVISVTQKSKAPARVLGVKGTTTLNAPLPTAFDPLVDMDPRLVVSF
PDLPRDADISALVLRFGGECELVWLNDKNALAVFHDPARAATAMRRLDHGTVYQGAVSFV
QNVGASAASSVTNAWGGTKEGGGLSTLRSNPWKKAVVLDPGWKEESWGEEQWGTGGSANI
QPSVLKKEAPIPASTNPWNVLNQESSSSSSFTTVMRSETSGKQTKSGVQPSTGGAIGGNK
DATEAAEVVDDWEQAFE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgcaaatgagacgagaaaggagggaagggtcgaggttcccttcacagcgtcct
cctcgacagctatgggttccgaaaggaacgggaggttcagcctcaaccaccgctgaaacc
actgcggaaaccaccgccacgaccactgcctcaaacactgccactacaactgttgcccac
cctacaggtttgcactctcgtgagaagaacagtaatggtgatgggggttcgtccaatcaa
gggactgttattgcttcaccgatggctaggcatagaagtaatcatcatgttgctcatagg
ggggaaagggaacatgttgctcatcatgttgaaagggggcatgttgctcatcgtgtagaa
agggaacatgttgctcatcgcggggaaaggggacatgttgctcatcgtgtggaaagagga
catgttgcacatagggttgaaaggggaagtgatagagggaggagtggaaatatggtgggg
agggaatatggattgagggactctagtttgcctcaattggtgcaggagattcaggagaag
ctcacaagaggtaccgtggagtgcatgatttgctatgatatggttcgtaggtcagcacct
gtttggtcttgctctagctgctactctatctttcacctgaactgtatcaagaagtgggct
cgtgcgcccacctcggttgatttatcagcggagaagaatttagggtttaattggcggtgt
cctggttgtcagtttgtgcaacatacgtcttcaagggatataaaatatgtctgcttttgc
ggaaagagggtagaccctccgtctgatttgtatttgacccctcattcgtgtggtgaaccg
tgcggaaagcctcttgagaaggaggtgtttggtactgaagggagaaaagatgagctttgc
cctcatgcttgtgtcttgcaatgccatccgggtccgtgtcctccatgtaaagcatttgcc
cctcctcgtttgtgcccttgtggaaagaaaagaattgccactcgttgctctgatcggcag
tctgatcttacttgcggtcagcgctgtgataagcttgttgattgtggacgtcatcgctgt
gaaaatgcttgccatgtgggtccctgtgatccttgtcaggtgctcatcaatgcatcttgt
ttttgcagtaaaatggaacaggttattttttgtggtgagatggctatgaaaggtgaattt
aaaccagaaggtggagttttttcgtgtggttctaattgtggaaaggaacttagttgtggt
aatcatatctgccatgaagcttgtcatccaggcggctgcggcgaatgtgaatttttacca
agccgggttaagacgtgctgttgtgggaaaacaaagctggatgcagaacggaagagttgt
gtggatccaatacctacctgctcacaagtatgtggcaagcgcctttgttgtgggatacat
gattgtcccgagccatgccatgttggggactgtccaccatgtaaggtccaaatttcacag
aaatgccgctgtggctccacttcccgaactgtggagtgctataaaacaatatcagagaat
cagaaatttacttgtgaaaagccgtgtggggcaaagaaaaattgtggaaggcaccgatgc
agtgaaaagtgctgtccaatgtcaggtccaaacattgatttgactaatgcagattgggat
cctcacttctgttccatgctatgtggaaagaagctgagatgtggccagcatgtgtgcgag
acgttgtgtcatagtggtcactgtccaccttgtcttgaaacaatcttcactgatttaaca
tgtgcttgtggtaggacctcaattcctcctcccctaccttgtggtacaatgcctcccttg
tgtcaacttccatgttcggttcctcagccgtgtggtcattctggctctcatagttgccat
ttcggagattgccctccatgttcggtgcccgtgtcaaaagaatgtgttggtggccatgtc
attcttaggaacataccttgcggctcaaataatattagatgcaataatccctgtggaagg
actagacaatgcggtttacatgcatgtggtaggacatgtcattcaccaccttgtgatgtt
ctacctggttttgtggaaggttaccgggcgccatgtggacagacatgtggtgctccaagg
agtggctgccggcacatgtgtatggctcaatgtcaccctacattttcttgcccggatgta
agatgcgagttccctgttacaattacttgttcttgtggtcggataacagcgaatgttcct
tgtgatgttggtggtagcaatagtaattataatgctgatgcagtatatgaggcttcaatt
attcaaaaattgcccatgccgcttcaaccggttgatgcaaacggccaaaaagttcccctt
ggacaaagaaagctgatgtgtgatgatgaatgtgctaagttggagcgtaaaagggttctt
gccgatgcattcgacatcactccaagtcttgatgctctccatttcggtgagaattcttca
tttgaattgctttccgacacgtttaggcgtgatccaaagtgggttttggctgttgaagaa
agatgcaaaatattagtacttgggaaaagcaaaggaacaacacatggtttaaaagtccat
gtcttttgtcctatgataaaggataaaagagatgccgtgagattgattgctgaaagatgg
aagcttgcagtgaacgctgctggttgggagccaaagcggtttatcgtaatttctgttacc
caaaaatctaaggctccagctcgtgtgcttggggttaagggtaccacaactttaaatgca
cctcttcctactgcatttgatccattggttgatatggacccgagacttgtcgtctccttt
ccagacttgccaagggatgctgatattagtgcgttggtacttcggtttggcggcgaatgt
gagcttgtttggttgaatgacaagaatgctttagctgtttttcatgatcctgcccgagcc
gcaactgcaatgaggaggttggatcacggaacagtttatcagggtgctgtttcgtttgtc
cagaatgtcggagcatctgcggcatcttcggttaccaatgcttggggagggacaaaagag
ggagggggattgtcaacactgagaagcaatccatggaaaaaggctgtggttcttgacccg
ggatggaaagaagaatcatggggcgaagaacaatggggtaccggtggttctgcgaatatc
caaccatctgttttgaagaaagaagcgccaatacccgcttcaacaaatccttggaatgtt
ttaaaccaggaatcaagttcgagctcatcgtttacaactgtcatgagaagtgaaacttct
ggaaaacaaacgaaaagtggtgtgcagccttctaccggcggagcaattggaggaaacaag
gatgcaacagaagctgctgaagttgtagatgattgggagcaagcttttgagtaa
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