Pisum sativum (pea): 127103252
Help
Entry
127103252 CDS
T08598
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
psat
Pisum sativum (pea)
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127103252
03041 Spliceosome [BR:
psat03041
]
127103252
03036 Chromosome and associated proteins [BR:
psat03036
]
127103252
Enzymes [BR:
psat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127103252
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127103252
mRNA cycle factors
Common to processing body (P body) and stress granule
127103252
Spliceosome [BR:
psat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127103252
Chromosome and associated proteins [BR:
psat03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127103252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
127103252
NCBI-ProteinID:
XP_050896472
LinkDB
All DBs
Position
7:248760940..248762903
Genome browser
AA seq
479 aa
AA seq
DB search
MAWSDSTTHKQSRPSQPLYVPQFRSNAPPPYNNRTHFPPSEDSSSFNRSTHRPRGRGGYG
YGPPRHFPRPEQQQPPRNFNYNHDPPHRNNRPPVEPRIEPENGVVANFEAYESIPVEATG
ENVPPPVNVFAETELHEDLKNNIERCKYVKPTPVQRYAIPIAVVGRDLMACAQTGSGKTA
AFCFPIISGIMKDRLGSGLSAMPHGGGSDVAYPTALILSPTRELSCQIHAEANKFAYQTG
VKIAVAYGGAPIGQQLRVLERGVDILVATPGRLVDMIERERVSLKKIKYLALDEADRMLD
MGFEHQIRNIVQQMNMPAPGARQTLLFSATFPDNIQKLASDFLSNYVFLAVGRVGSSTEL
IVQKIESVQDMEKRNRLVDLLRRNVVNGKLALSLIFVETKKGADALESWLCRSGFPAIAI
HGDKVQMVNSFCSLLYFLSTVTVPYALFVSVFVVPRAINSNILIIESKIKLEVATLSYT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcatggtctgattcaactactcacaaacaatctcgtccctctcaacccctctacgtt
cctcaattccgttccaatgctcctcctccctacaacaaccgaacccattttcctccgtcc
gaggattcatcatctttcaatcgctccactcacagaccacgtggccgaggcggttacggt
tatggtcctccacgtcatttccctcgacccgaacaacaacaaccgccgcggaacttcaac
tacaaccacgatcctcctcatcggaacaatcgccctccggttgagccccgcattgagcca
gaaaacggcgtcgttgcgaattttgaagcgtatgaatctatccccgttgaggctaccggc
gagaacgtgcctccgccggtgaatgtctttgctgaaaccgaacttcatgaggatttgaag
aataacattgagagatgtaagtatgtgaaacctactccggttcagcgttacgcgatcccc
attgctgttgtcgggagagaccttatggcctgtgctcagactgggtctggtaaaacggcg
gcgttttgttttccgattatatctgggattatgaaagatcgtttaggttctgggttgtcg
gctatgccacatggcggtggttccgatgttgcgtaccccactgcactcatcttgtctcca
actagggagttatcatgccagatacatgctgaagcaaacaagtttgcttatcaaacagga
gtgaagattgcggttgcttacgggggtgctcctattggtcaacagctacgtgttttggag
agaggtgttgatattttggttgcaactcctgggcgtttggtggatatgattgaaagagaa
agggtttctttgaagaagattaagtatcttgctttggatgaggctgatcggatgctggac
atgggttttgagcatcagattcgcaacattgttcagcagatgaacatgcctgctccggga
gctagacagactttgcttttcagtgccacctttcctgataatatacagaagcttgcatct
gattttttgtcaaactatgtgttcctggctgttggaagggttggttcaagcactgaattg
attgtacagaaaattgaatcggttcaggatatggagaaaaggaatcgtcttgtggatctt
ctccgacgcaatgtagtcaatgggaagcttgctttatctcttatatttgttgaaacaaag
aaaggagcagatgctttagaaagttggctatgcagaagtggttttccagctattgcaata
catggtgacaaggttcaaatggttaatagcttttgttctttactttatttcctctctact
gttacagtgccttatgctttatttgtttctgtatttgtggtccctcgtgcaatcaattcc
aacattttgatcatagaatccaaaataaaacttgaagtagctactcttagttatacttga
DBGET
integrated database retrieval system
