KEGG   Pisum sativum (pea): 127103692
Entry
127103692         CDS       T08598                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
psat  Pisum sativum (pea)
Pathway
psat03030  DNA replication
psat03410  Base excision repair
psat03420  Nucleotide excision repair
psat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127103692
   03410 Base excision repair
    127103692
   03420 Nucleotide excision repair
    127103692
   03430 Mismatch repair
    127103692
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psat03032]
    127103692
   03036 Chromosome and associated proteins [BR:psat03036]
    127103692
   03400 DNA repair and recombination proteins [BR:psat03400]
    127103692
DNA replication proteins [BR:psat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    127103692
  DNA Replication Termination Factors
   ELG1-RFC complex
    127103692
Chromosome and associated proteins [BR:psat03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    127103692
DNA repair and recombination proteins [BR:psat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     127103692
  Check point factors
   HRAD17(Rad24)-RFC complex
    127103692
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 Sigma54_activ_2 RsgA_GTPase DUF815 ABC_tran RuvB_N AAA_16 AAA_22 AAA_23 nSTAND3 AAA_29 AAA_5 TsaE AAA_24 AAA_2
Other DBs
NCBI-GeneID: 127103692
NCBI-ProteinID: XP_050896911
LinkDB
Position
1:53001207..53006131
AA seq 354 aa
MLWVDKYRPKTLDHVMVHNDIAQNLKKLVTEHDCPHLLFYGPSGAGKKTLIMALLRQMFG
TGAEKVKVENRAWKVDAGSRSIDLELTTLSSANHIEMTPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR
CLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQY
PFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYE
LLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggttgacaagtatcgtcccaagactctcgaccatgttatggttcacaatgac
atcgctcaaaatctcaagaaattggttaccgaacatgattgccctcatttgttgttctat
ggcccatcgggcgctggcaagaaaacactaattatggctcttctccgccaaatgtttgga
actggtgctgaaaaggtgaaggtggagaatagggcatggaaagttgatgctgggagtaga
tctattgatttagagctgactacattatcaagtgccaatcatatcgaaatgactccaagt
gatgcaggctttcaggacagatacatcgttcaagaaataatcaaagaaatggccaagaat
agaccaattgatactaaagggaagaaaggatttaaagtactagtgcttaatgatgttgac
aaactctctagagaagcccaacattctctccgcagaacaatggagaaatacagtgcttat
tgcagattaattctatgttgcaatagttcttcaagagtaacagaagcaatccgctcccgt
tgtcttaatgtacgaataaacgcaccaagtgaagaacagattgttgaagttttacagttc
attggtaagaaagaaggactgcaacttccttctagttttgctgctcgcattgcagagaaa
tctaaccggaatttaaggagggccatattgtcatttgagacttgccgtgtccaacagtat
cctttcactgacaagcaaacaatttccccaatggactgggaagaatatatttctgaaatt
gcatctgacataatgaaggaacagagcccaaaaaggctgtttcaagttcggggaaagcta
tatgagttgctgatcaattgcattcctccagagattattttgaagaggcttctttatgag
ctattaaggaaactagatgcagaactgaagcatgaagtctgccactgggcagcatattat
gagcataggatgcgccttgggcagaaggcaatttttcacattgaagcatttgtagcgaag
tttatgagcgtctataaatccttcctcattgcaacatttggctga

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