KEGG   Lathyrus oleraceus (garden pea): 127104971
Entry
127104971         CDS       T08598                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
psat  Lathyrus oleraceus (garden pea)
Pathway
psat03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    127104971
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psat04121]
    127104971
   03036 Chromosome and associated proteins [BR:psat03036]
    127104971
Enzymes [BR:psat01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     127104971
Ubiquitin system [BR:psat04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    127104971
Chromosome and associated proteins [BR:psat03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     127104971
    Noncanonical PRC1 (PRC1.1)
     127104971
    Noncanonical PRC1 (PRC1.3/1.5)
     127104971
    Noncanonical PRC1 (PRC1.6)
     127104971
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-RING_4 zf-UDP zf-RING_6 zf-Nse zf-rbx1 zf-C3HC4_5 zf-RING_10 zf-RING_11
Other DBs
NCBI-GeneID: 127104971
NCBI-ProteinID: XP_050898069
LinkDB
Position
7:complement(197267841..197273729)
AA seq 440 aa
MPSQKRSFEEALEENEDSENEINNDEQPKDEDESDQSRSSDDEEEDEDEEEEEEYVAIKL
SDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRD
DPSYDALIAVMYPDIDKYEEQELALHEDEMARHKQFQASIAQTLKRQSEALSKKRNAKAT
SVAFVRRSQGNSRTSNLKRRRNFRNAGDFQVSNDNKGMDDIDGGKGSSSDDGQTETQPRR
CKRGGEQEAQFPQHSPSTEPDGVGDENTPEVNREILSASGTLSWGKNGHRSHSRVNGKNA
KNNRISKLVEHIRNSAKNGYELFQLPTFLMLVSLDEQRIPSLEDPCLTCKPTMSVKILRK
HVANETAMPEAEVDLWLILKPRSSFEEGERTIDPNTDNLRILEDQETLAELLGTYENTSH
GYLVMAYKRKLQNSDTVELS
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgccgtcacagaagcgttctttcgaagaggctctcgaagagaatgaagactctgaaaat
gagataaacaacgacgagcaacctaaagatgaagacgaatcagatcaaagccgttcatct
gacgacgaagaagaagatgaagatgaagaggaagaggaagaatatgtggctataaaattg
tcagatgtacgcaaggaagttcagtgtcctatctgccttggtatcattcgaaaaacaaga
accgttatggaatgccttcatcgcttttgcagagagtgcatagacaaatccatgcgcctt
ggtaacaatgaatgtcctgcttgccgtactcattgtgctagccgacgctcattgagagat
gacccaagctacgatgccttgattgctgttatgtatccagatattgacaagtatgaggaa
caggaattggctttgcatgaggatgagatggctcgccataagcagtttcaagcatccatt
gcccaaacactaaaacggcaatcagaagcgttgagtaaaaaacgaaatgccaaagcaaca
tcagtggcttttgtgaggagatcccaaggcaactctcgaacttcgaatctcaaacgtcga
agaaactttagaaatgctggtgactttcaggtatccaatgacaacaagggtatggatgat
attgatgggggaaagggatcatcttctgatgatgggcagacagaaacccagccaagaaga
tgcaaaagaggtggagaacaagaagcacaatttcctcagcattctccctctactgaacca
gatggagttggtgatgaaaatactccagaagtaaatagggaaatcctaagtgcatctggc
acactttcctggggaaaaaatggtcaccggagtcacagccgagtcaatggaaagaatgcc
aaaaacaaccgcatctccaaattggttgaacatattcgtaactcagcaaaaaatggttat
gagttatttcagctgcctacctttctcatgcttgtctcgttggatgagcaaagaatacca
agtttggaggatccatgccttacttgcaagcctaccatgtcagtcaagatactgcgcaag
catgtagcaaatgaaactgccatgcctgaggctgaagttgacttgtggttgatactcaag
ccacgatctagctttgaagaaggtgaaagaaccatcgatccaaacacagataatttacgc
attctagaagaccaagaaacattggccgaattgctgggaacttatgaaaataccagccat
ggttatctggtcatggcttacaagaggaagttgcagaattcagacacagttgagttaagc
tga

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