Lathyrus oleraceus (garden pea): 127106309
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Entry
127106309 CDS
T08598
Name
(RefSeq) actin cytoskeleton-regulatory complex protein PAN1-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat03013
Nucleocytoplasmic transport
psat03015
mRNA surveillance pathway
psat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127106309
09122 Translation
03013 Nucleocytoplasmic transport
127106309
03015 mRNA surveillance pathway
127106309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psat03019
]
127106309
03041 Spliceosome [BR:
psat03041
]
127106309
Messenger RNA biogenesis [BR:
psat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127106309
Spliceosome [BR:
psat03041
]
Complex C
Other components
EJC/TREX
127106309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Med26_C
Motif
Other DBs
NCBI-GeneID:
127106309
NCBI-ProteinID:
XP_050899578
LinkDB
All DBs
Position
7:complement(156392278..156396619)
Genome browser
AA seq
701 aa
AA seq
DB search
MLNFVTEVSEMDGNAVKQNNACTEIILAAVVDTVVKKISEKGNSAVVHPIETENEEMIPD
VVSNDSVKSDKPVDDDLNAVVDQQVERIDFAACADSVNVTDKLIRSSTKETAVAVTESVL
TEAVVSDPEGSTSAEPQNGHGPDSVTKQENKELRHQLECDLKPQCEHLTPHSLLPQNQVS
EVNPSLGSQVKSDSVSCNFVSTNQKNELKNTIIANNVKLEQEIVRSKMVEEPSSRIDVPV
YEESHSKDVEEADGKKVSVEENSSINRRPNLNKTNSNEDVGYLEKLYLDGSSGDDSMEED
MPESKQFDSKSNVGKLREKGESVEIMNVKEHDTVMVRDGLSSEGGIYSNNDIPSVSPVKK
HKFLDQTSVGNNNRAKRRRWNSETVNGSNTQRSTVRPATAPMGEPISLKSNFSWSDSPTI
DDALKERIVPPSQWPPTNSLKIDGFLRPFTLKAVQGLLGKTGNFTSFWMDEIKTHCYVSY
TTVEEAVETRNAVYNLQWPPNVGRLLVAEFVEPEDVKMKLEPPPPVDFVNNDSTAPPVPV
TLRPPAARERFPPPPALSMLSPAARERFPPPPPLSMLPPAATEQLPPPPPLSELPAPPRE
WLPLAPPKEWLPLPPPPREWLPLPPPPREWLPLAPPLSNLSPDVRERILSPPPLPKKVDK
TIVTIDDVFRKTRATPRIYYLPLSDGQVAAKLAAMGRGVKQ
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgttgaattttgttactgaggtttctgagatggatgggaatgctgtgaagcaaaacaat
gcatgtactgagattatacttgctgcagttgttgatactgttgtaaagaaaatttctgag
aagggtaacagtgctgtagtccatccaattgaaacagaaaatgaagaaatgattccagat
gttgtgagcaatgacagcgtaaagagtgacaagccggttgacgatgatcttaatgcagtg
gtggaccaacaagtggaacgtattgactttgcagcttgtgcagattctgtaaatgtgaca
gacaagttaattcgctcttctactaaagagactgccgttgcagtcactgagagtgtctta
acagaagctgtagtcagcgatccggagggttcaactagtgcagagccacagaatggccat
ggtccagattctgtaaccaagcaggagaataaggagttaaggcaccagctggagtgcgac
ttaaagccccaatgtgagcatctcacaccccactctttgcttcctcaaaatcaggtatct
gaggtcaaccctagtttagggtcacaagtaaaatctgattccgtttcttgtaattttgtg
tcgactaatcaaaagaatgaactaaagaatactataattgctaataatgtcaaattagaa
caagaaattgttaggtcaaagatggtggaagagccatcatccagaattgatgtgcctgta
tatgaggaatcacattcgaaggatgttgaagaggcagacgggaaaaaggtatctgttgag
gaaaatagcagtatcaacagaagaccaaacctgaacaagaccaatagcaatgaagatgtt
gggtatctagaaaagttgtacttggatggaagttctggtgatgattccatggaagaggat
atgccggagagcaagcaatttgattctaagtctaatgttggcaaacttagagagaaaggg
gaaagtgttgaaataatgaatgtgaaggagcatgatactgttatggtaagagatggtcta
tcctcagaaggtggtatctactccaataatgatattccttctgtttcccctgtcaagaaa
cacaaatttctggatcaaacatcagttgggaataacaatcgtgcaaaacgacgaaggtgg
aactctgaaacagttaacggttcaaatacacaaagatcaactgtcagacctgctactgct
cctatgggtgagccaatttcattgaagagcaatttctcttggtctgattccccaacaatc
gatgatgcgctcaaagaacgcattgttccaccatcacaatggcccccaactaattccctc
aaaatcgatggtttcctccgaccttttaccttaaaagcagtgcaaggacttctgggtaaa
actgggaatttcaccagtttttggatggacgaaataaaaacccattgctacgtcagttac
acaactgttgaggaagccgtggagacccgaaatgctgtttataatcttcaatggcctcca
aatgttggacgtcttttagttgctgagtttgttgaacccgaagatgtgaaaatgaagcta
gaacctcctccccctgttgactttgtcaacaatgattcaacagctcctccagttccagtc
acacttcgtcctccagcggctagagagcggtttcccccgccaccagctttgtcaatgctc
tcaccagcggctagagagcggtttccgccgccaccacctttgtcaatgctcccaccagca
gctacagaacagcttccgccaccaccacctttgtcagagctcccggcaccacctagagaa
tggcttccactggcaccacctaaagaatggcttccactgccaccaccacctagagaatgg
cttccactgccgccaccacctagagaatggcttccattggcaccaccattgtcaaatctc
tcgccagatgttagagaacggattctatcgccaccacccctcccaaagaaagttgacaaa
actattgttacaattgatgatgtctttcgcaaaaccagagcaactcctcggatctattat
ttaccattatccgacgggcaagttgcagcaaaactggcagcaatgggcagaggcgttaag
cagtag
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