Lathyrus oleraceus (garden pea): 127107295
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Entry
127107295 CDS
T08598
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
psat
Lathyrus oleraceus (garden pea)
Pathway
psat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
psat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127107295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psat04121
]
127107295
Enzymes [BR:
psat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127107295
Ubiquitin system [BR:
psat04121
]
Ubiquitin ligases (E3)
U-box type E3
127107295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
MLKL_N
HEAT_2
zf-RING_UBOX
Neurochondrin
zf-Nse
zf-C3HC4_4
KAP
Arm_2
zf-C3HC4_2
zf-C3HC4
HEAT_EF3_GNC1
Motif
Other DBs
NCBI-GeneID:
127107295
NCBI-ProteinID:
XP_050900548
LinkDB
All DBs
Position
7:482617566..482622636
Genome browser
AA seq
663 aa
AA seq
DB search
MEGEQVNVIIDLVNEISYISDFRPMVKKQYCNLARRLKLLIPLFEEIRDMNDSIPDHTSK
ALILFKQALESARELLRFGTEGSKIYMVLERDQIMKKFYDVTARLEQSLDGISYDKLDIS
DEVKEQVELVLAQFRRAKGRVDEPDIKLYEDISSLYNNSSDAATDSAVLSRLADKLQLMG
IADLTQESLALHEMVAASSGDPGARIEKMSMLLKKIKDHVQIENLVKDDTIIAKGVSSGF
HGLGKNDTSHQVPVIPSDFKCPISLELMTDPVIVSTGQTYERSCIEKWLQDGHMTCPKTQ
QSLTSTVVTPNYVLRSLIEQWCEANGIEPPKRPSTSEPSKSASACSPAERSKIENLIQKL
TSGGPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSVPDSRTQEHAVTALLNL
SIYESNKGSIVSSGAVPGIVHVLKRGSMEARENAAATLFSLSVIDENKVTIGSSGAISPL
VTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMRLLTEPSGGMVDEALAIL
AILSSHPEGKSAIGAAEAVPVLVEFIGNGSPRNKENAAAVLVHLCSGDRQYIAQAEELGV
MAPLLELAQNGTDRGKRKAAQLIERMNRIREQEQHEVQIQAELLPQNDDIQPPPLIINLD
IDT
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaacaagtaaacgttataattgacctagtcaatgagatttcttacatctct
gacttcaggcctatggtgaagaaacagtattgtaatttagcacggaggttgaagctcttg
atccctttgttcgaggagattcgggatatgaatgattcaatccctgatcacacttcaaaa
gctctgattttgtttaaacaagctctcgaatcagctagggaacttctcagatttggaact
gaaggaagcaagatttacatggtccttgagcgagaccagattatgaaaaaattctatgac
gtgacagctcggttggaacaatcgctggacggaatttcctacgataaacttgacatctca
gatgaagttaaagagcaggttgaactagttcttgctcaatttcgtagggcaaaagggaga
gttgatgaaccagatatcaagttgtatgaagatatttcatccctatacaacaatagcagt
gacgcagcaacagattcagctgttctaagtcgattagcagacaaattgcaattgatggga
atagccgatcttacacaagaatcactcgctttgcatgagatggtggcagcaagtagtggg
gatccaggggcgcgcatcgagaaaatgtcaatgttattgaagaagataaaggatcatgtg
caaatagaaaacctagtcaaggatgatactataatagcaaaaggcgtttcttcaggattt
cacggactagggaaaaatgatacgagtcatcaggtccctgttatcccaagtgattttaaa
tgtccgatttccttggaattgatgacggatcctgtcattgtttcaacaggacagacttac
gagcgttcctgtattgagaagtggttgcaagacgggcacatgacatgcccaaaaacacag
cagtctctcacaagtactgttgtcacacccaactacgtcttacgaagcctgatagaacaa
tggtgtgaagccaatggcatagagccaccaaaacgacccagcacttctgagccaagtaaa
tcagcatcagcctgctccccagctgagcgaagtaagattgaaaatctaattcaaaagctc
acatctggtggtcctgaagaccagagatcagctgccggcgagatccgccttcttgcgaaa
cgcaatgcagataatcgtgtagctattgctgaagctggtgcaatacctcttctcgttggt
ctcctctctgtgcccgactcccgaactcaagagcatgctgtaacagcgcttctgaatctc
tccatatatgagagtaacaaaggaagcatcgtctcttcaggagcagttccaggcatagtt
catgtgctgaagaggggaagcatggaagctcgggaaaatgcggctgcaacacttttcagc
ctttcagttatagatgaaaataaggttacaattggttcttccggagccatatcaccactg
gtgacactgctgagtgagggtacccaaaggggtaagaaagatgctgccacagcactcttc
aatttgtgcatttaccaaggaaacaagggaaaggcagtgagagctggtgttattcccacg
ctgatgcgacttctgacagaacctagcgggggaatggtggatgaagcattggccattttg
gccattttgtctagtcatcctgaagggaagtctgccattggtgctgcagaggcagtgccg
gtgttggtagagtttattgggaatggatccccaaggaacaaagagaacgcagctgcggtg
ttagttcacctttgttctggcgatcgacaatatatagcgcaggcagaggagctgggggtg
atggctcccctgttggaattggctcaaaatggtactgacagaggtaaaagaaaggcagca
caattgatagagcgaatgaacaggatccgggagcaagaacagcatgaagttcagatacaa
gctgaacttctacctcagaatgatgatatccaaccaccacctttgatcattaacctcgac
attgacacctga
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