KEGG   Lathyrus oleraceus (garden pea): 127112063
Entry
127112063         CDS       T08598                                 
Name
(RefSeq) replication factor C subunit 2-like
  KO
K10755  replication factor C subunit 2/4
Organism
psat  Lathyrus oleraceus (garden pea)
Pathway
psat03030  DNA replication
psat03410  Base excision repair
psat03420  Nucleotide excision repair
psat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:psat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127112063
   03410 Base excision repair
    127112063
   03420 Nucleotide excision repair
    127112063
   03430 Mismatch repair
    127112063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psat03032]
    127112063
   03036 Chromosome and associated proteins [BR:psat03036]
    127112063
   03400 DNA repair and recombination proteins [BR:psat03400]
    127112063
DNA replication proteins [BR:psat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    127112063
  DNA Replication Termination Factors
   ELG1-RFC complex
    127112063
Chromosome and associated proteins [BR:psat03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    127112063
DNA repair and recombination proteins [BR:psat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     127112063
  Check point factors
   HRAD17(Rad24)-RFC complex
    127112063
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 AAA_14 AAA_22 AAA_16 Rad17 Mg_chelatase Viral_helicase1 nSTAND3 AAA_11 RuvB_N AAA_5 AAA_19 DEAD AAA_24 AAA_28 AAA_30 RNA_helicase MeaB AAA_25 AAA_18 ABC_tran bpMoxR NTPase_1 KTI12 IstB_IS21 SLFN-g3_helicase NPHP3_N AAA_7 AAA_3 T2SSE DO-GTPase1 AAA_29
Other DBs
NCBI-GeneID: 127112063
NCBI-ProteinID: XP_050902211
LinkDB
Position
Unknown
AA seq 190 aa
MASSSSSNSANYDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGK
TTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDE
ADSMTSGAQQALRRTIEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRL
MVVVQAEKVC
NT seq 573 nt   +upstreamnt  +downstreamnt
atggcatcgtcatcctcaagcaacagcgcaaactacgacgtaccgtgggttgagaagtac
cgacccagcaaggtcgtcgacatcgtcggcaatgaagacgccgtctcccggctccaagtc
atcgctcgtgacggcaacatgcccaacctcattttatcaggtcctcctggaactggaaaa
accactagcatcctcgcacttgcgcacgagcttctcggtcccaattacagagaagctgtt
cttgaactaaatgcttcagatgatagaggaatagatgttgtgaggaacaagatcaagatg
tttgctcaaaagaaagtaacacttcctccaggccgacacaaagttgttatactcgatgaa
gctgacagtatgacatctggagcacaacaagctttaagaaggacgatagagatatattct
aattctactcgtttcgcgcttgcttgcaatacatcgtctaagattattgagccgattcag
agtaggtgtgcaattgtgagattttcgcgactatctgatcaagagatacttggtcgtctc
atggttgtggttcaagctgagaaggtgtgctga

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